RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MYRFQ9Y2G1 1151 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 H0Y626 953 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CRCPO75575 148 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 H6PDO95479 791 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 ALPIP09923 528 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 HSPA13P48723 471 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CHSY3Q70JA7 882 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 DHFR2Q86XF0 187 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CDK15Q96Q40 435 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 ACOX2Q99424 681 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 CLSTN3Q9BQT9 956 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 TUBB1Q9H4B7 451 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 EBF1Q9UH73 591 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 FAF1Q9UNN5 650 aaPredicted RBP13.04□□□□□ -0.32
CTNS-201ENST00000046640 ASB1Q9Y576 335 aa13.04□□□□□ -0.32
CTNS-201ENST00000046640 C2orf81A6NN90 581 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 HTRA2O43464 458 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 KDELR3O43731 214 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 NRP2O60462 931 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 ECI2O75521 394 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 HMGA1P17096 107 aaKnown RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 ZNF140P52738 457 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 PRKCQQ04759 706 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 ACVR1Q04771 509 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 BFSP2Q13515 415 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 SQLEQ14534 574 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 HERC3Q15034 1050 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 UGT3A1Q6NUS8 523 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 LARP4Q71RC2 724 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTNS-201ENST00000046640 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 FUNDC1Q8IVP5 155 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 CLYBLQ8N0X4 340 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 FBXO39Q8N4B4 442 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 SLC43A3Q8NBI5 491 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 EEF1AKMT1Q8WVE0 214 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 CYGBQ8WWM9 190 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 FATE1Q969F0 183 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 ATOH8Q96SQ7 321 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TDRD1Q9BXT4 1180 aaKnown RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 OLAHQ9NV23 265 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TAS2R13Q9NYV9 303 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 RNF103-CHMP3A0A140T963 221 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 AZIN1O14977 448 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 BNIP3LO60238 219 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TBL1XO60907 577 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 STAMBPO95630 424 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 ATP6V1B2P21281 511 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 DIO3P55073 304 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 ARF5P84085 180 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TRAF2Q12933 501 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 C18orf21Q32NC0 220 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 FUT11Q495W5 492 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 CHST15Q7LFX5 561 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 RETREG3Q86VR2 466 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 CBR4Q8N4T8 237 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 HAUS8Q9BT25 410 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 NLE1Q9NVX2 485 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 PLXNA3P51805 1871 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 STX7O15400 261 aaKnown RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 ZSCAN9O15535 394 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 EPOP01588 193 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TFPTP0C1Z6 253 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 HGFP14210 728 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 SH3BGRP55822 239 aaPredicted RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 STX1BP61266 288 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 USP41Q3LFD5 358 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 TBCELQ5QJ74 424 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 C6orf10Q5SRN2 563 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 FAR2Q96K12 515 aa13.03□□□□□ -0.32
CTNS-201ENST00000046640 ELAC1Q9H777 363 aaKnown RBP13.03□□□□□ -0.32
CTNS-201ENST00000046640 A0A0J9YYE9 177 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 ANKRD66B4E2M5 251 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 CLDN11O75508 207 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 APLP1P51693 650 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.33
CTNS-201ENST00000046640 CLCQ05315 142 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 ELAVL2Q12926 359 aaKnown RBP13.02□□□□□ -0.33
CTNS-201ENST00000046640 RFTN1Q14699 578 aaPredicted RBP13.02□□□□□ -0.33
CTNS-201ENST00000046640 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 PLA2G4EQ3MJ16 856 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 ADGRF1Q5T601 910 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 TXNDC8Q6A555 127 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 WFDC5Q8TCV5 224 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 MIPOL1Q8TD10 442 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 NUDT8Q8WV74 236 aa13.02□□□□□ -0.33
CTNS-201ENST00000046640 PBXIP1Q96AQ6 731 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms