RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Rpn2Q9DBG6 631 aaKnown RBP15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 EefsecQ9JHW4 583 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Copg1Q9QZE5 874 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gbp11A9YVJ5 442 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Atn1O35126 1175 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Nedd9O35177 833 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Smad6O35182 495 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Hs3st1O35310 311 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Grk4O70291 574 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Caprin1Q60865 707 aaKnown RBP15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Xlr3cQ61806 226 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ubtd2Q6PGH0 234 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 PolnQ7TQ07 864 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ckap2lQ7TS74 745 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Serpinb9dQ8BMT0 377 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Sfr1Q8BP27 319 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 PigwQ8C398 503 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zbtb8bQ8CII0 484 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Wbp11Q923D5 641 aaKnown RBP15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pbld2Q9CXN7 288 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ilf2Q9CXY6 390 aaKnown RBP15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vsig1Q9D2J4 407 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Grb14Q9JLM9 538 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Insl5Q9WUG6 135 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Slc4a5E9Q3M5 1116 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Smpd2O70572 419 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 A1bgQ19LI2 512 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cog7Q3UM29 770 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Xlr3aQ60595 226 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Brsk2Q69Z98 735 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Olfr1080Q7TR67 313 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Peli3Q8BXR6 445 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Sh3rf2Q8BZT2 735 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Oas1cQ924S2 362 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 PclafQ9CQX4 110 aaKnown RBP15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 4930578G10RikQ9D4Q4 153 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cyp3a44Q9EQW4 504 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pkp3Q9QY23 797 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Apobec2Q9WV35 224 aa15.77■□□□□ 0.11
Trim39-203ENSMUST00000113706 Frem3Q5H8B9 2123 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Igkv12-46A0A140T8P6 115 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zfp472B0V2W5 534 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 1700024B05RikE9Q6D7 167 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 NxnP97346 435 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Amer3Q6NS69 780 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 ManealQ6P1J0 452 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fam107aQ78TU8 144 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dsg1bQ7TSF1 1060 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tmcc2Q80W04 706 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Svs2Q8BS30 375 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Nmur2Q8BZ39 395 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tgif2Q8C0Y1 237 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Wdr74Q8VCG3 384 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Slc44a3Q921V7 656 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gpr63Q9EQQ3 425 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Prokr1Q9JKL1 393 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 DnpepQ9Z2W0 473 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Igkv12-98A0A0G2JGF9 115 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Olfr742A2RTP5 311 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fam151bD3YUE4 279 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cldn24D3YXJ9 220 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 H2-T24F8VQG4 363 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 AmacrO09174 381 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Eno3P21550 434 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 ThraP63058 492 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Rsrp1Q3UC65 298 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fam160a1Q505K2 1081 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Smpd4Q6ZPR5 823 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Atp2c1Q80XR2 918 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fam221bQ8C627 487 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Serpinb10Q8K1K6 397 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gsg1Q8R1W2 324 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ssx2ipQ8VC66 615 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 AmotQ8VHG2 1126 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cmc1Q9CPZ8 106 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Bcl7aQ9CXE2 210 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Snrnp48Q9D361 337 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cdkl2Q9QUK0 568 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cyhr1Q9QXA1 311 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cacna1cQ01815 2139 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 OtofQ9ESF1 1997 aa15.76■□□□□ 0.11
Trim39-203ENSMUST00000113706 Igkv16-104A0A0B4J1I1 116 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gbp4A4UUI3 631 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Vmn2r116E9Q6I0 856 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zfp275G3X904 499 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ech1O35459 327 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Top3aO70157 1003 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 CidebO70303 219 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Akap10O88845 662 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Sstr3P30935 428 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gucy2eP52785 1108 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Hrh1P70174 488 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Traf6P70196 530 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Rab33aP97950 237 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 KizQ3UXL4 695 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Kcna4Q61423 654 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zbtb24Q80X44 710 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Itln1bQ80ZA0 313 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 SgtaQ8BJU0 315 aa15.75■□□□□ 0.11
Trim39-203ENSMUST00000113706 Rnf186Q9D241 226 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms