RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Cylc2B1AWN8 422 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cyp2c68K7N6C2 491 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Polr2jO08740 117 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 PthlhP22858 175 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tnfsf4P43488 198 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Nr5a2P45448 560 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Pdcd5P56812 126 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Polr2iP60898 125 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Serpinb5P70124 375 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Nfatc3P97305 1075 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Dnal1Q05A62 190 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 UcmaQ14BU0 138 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Xkr4Q5GH67 647 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Reps2Q80XA6 521 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Fmo9Q8C116 539 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cox18Q8VC74 331 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Setd7Q8VHL1 366 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Serpinb11Q9CQV3 388 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 CtszQ9WUU7 306 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Osbpl10S4R1M9 766 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Eif2b3B1AUN2 452 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 4930426L09RikE9Q0N7 123 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Klf10O89091 479 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cyp2a12P56593 492 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Npy2rP97295 381 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Psme2P97372 239 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 PamP97467 979 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 NkaplQ5SZT7 395 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Dyrk2Q5U4C9 599 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Fscn1Q61553 493 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cntn4Q69Z26 1026 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Hs3st5Q8BSL4 346 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Pdcd2lQ8C5N5 364 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Piwil2Q8CDG1 971 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 TbccQ8VCN9 341 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 MiosQ8VE19 875 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Lgals12Q91VD1 314 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cd209eQ91ZW7 208 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Q922R1 422 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Stard13Q923Q2 1113 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Pramel1Q99MW3 458 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Mrpl1Q99N96 336 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Lrrc40Q9CRC8 602 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 D7h11orf16Q9JJR6 402 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Syt5Q9R0N5 386 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Psma4Q9R1P0 261 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Rfc2Q9WUK4 349 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cdc42ep5Q9Z0X0 150 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tspoap1Q7TNF8 1846 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Wfdc16A2A5H4 111 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gm7073E9QAS1 335 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Hk2O08528 917 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Hes2O54792 157 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Lamp1P11438 406 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Slc30a3P97441 388 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gsdmc2Q2KHK6 480 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Lsmem1Q3UQS2 128 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Nr2c1Q505F1 590 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 CcncQ62447 283 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Avpr1aQ62463 423 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gja6Q6S5G4 283 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Nup54Q8BTS4 510 aaKnown RBP10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ctxn3Q8BXZ0 80 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gsdmc3Q8CB12 480 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Fem1cQ8CEF1 617 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Il31raQ8K5B1 716 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ing3Q8VEK6 421 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Olfr1352Q8VGX5 309 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Kif12Q9D2Z8 642 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Dlgap1Q9D415 992 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Bpifa3Q9D9J8 232 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Pik3cgQ9JHG7 1102 aa10.25□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tmem45a2B7ZWJ5 289 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Trim15G3UY57 292 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Capn5O08688 640 aaKnown RBP10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 NagluO88325 739 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 CcnoP0C242 352 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 DckP43346 260 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Magee1Q6PCZ4 918 aaKnown RBP10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tmtc4Q8BG19 741 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Mterf2Q8BKY8 385 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Prpf18Q8BM39 342 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ifi205aQ8CGE8 404 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Lsm14aQ8K2F8 462 aaKnown RBP10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Mta3Q924K8 591 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 AassQ99K67 926 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Atp6v1c2Q99L60 427 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 March2Q99M02 246 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cmc1Q9CPZ8 106 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tomm70Q9CZW5 611 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Efhd2Q9D8Y0 240 aaKnown RBP10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Apbb2Q9DBR4 760 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Aff4Q9ESC8 1160 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Dctn3Q9Z0Y1 186 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gm43951A0A0N4SUT6 962 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 S100zB9EJL3 99 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Vmn2r53L7N473 806 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 AprtP08030 180 aa10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 Spp1P10923 294 aaKnown RBP10.24□□□□□ -0.77
Clip3-201ENSMUST00000014065 WarsP32921 481 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms