RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Asf1aQ9CQE6 204 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Acbd6Q9D061 282 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cndp2Q9D1A2 475 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 LipaQ9Z0M5 397 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4931406B18RikA2RSL7 367 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Armc4B2RY50 1037 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn2r120E9PX34 856 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pbx3O35317 434 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 CatP24270 527 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cyp17a1P27786 507 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Polr1cP52432 346 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Btbd1P58544 488 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fgf1P61148 155 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Npy2rP97295 381 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Srebf2Q3U1N2 1130 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dpp10Q6NXK7 797 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr1355Q7TQU9 310 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slitrk4Q810B8 837 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem17Q8K0U3 198 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Polr1eQ8K202 482 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TtpalQ9D3D0 343 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ebna1bp2Q9D903 306 aaKnown RBP9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc15a2Q9ES07 729 aa9.12□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Setbp1Q9Z180 1582 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kdm6bQ5NCY0 1641 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm21885A0A286YDN8 145 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn1r3A2AMT7 306 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn2r51L7N215 852 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 DgkaO88673 730 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ap2a1P17426 977 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ptpn1P35821 432 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Arhgap9Q1HDU4 648 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Q3U4G0 281 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rnft2Q3UF64 445 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Syndig1lQ3USQ7 237 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Foxr1Q3UTB7 268 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc6a3Q61327 619 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cbx5Q61686 191 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 P4ha3Q6W3F0 542 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kxd1Q80XH1 177 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn1r79Q8R285 306 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pdia5Q921X9 517 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4930519G04RikQ9CPT7 205 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dnajc19Q9CQV7 116 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hm13Q9D8V0 378 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 NbnQ9R207 751 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Abca16E9PWJ7 1678 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Chil5A0A0G2JDS2 431 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mkrn2osD3Z393 217 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 SmgcF6VRN1 385 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn2r86G5E8Y4 848 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 NrlP54846 237 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 UrodP70697 367 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PepdQ11136 493 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kctd21Q3URF8 260 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Taar7fQ5QD08 358 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Taar7eQ5QD09 358 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Taar7dQ5QD10 358 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Taar7bQ5QD11 358 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Papss1Q60967 624 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ube2r2Q6ZWZ2 238 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gpr142Q7TQN9 365 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr20Q7TRX9 314 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Igdcc3Q8BQC3 813 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kcnk10Q8BUW1 535 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Apbb3Q8R1C9 486 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 SarafQ8R3Q0 334 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PdgfdQ925I7 370 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tdrd12Q9CWU0 1215 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PtprmP28828 1452 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 S100a2J3QMC7 104 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm5849J3QPE5 117 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pitpnm1O35954 1243 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Akap3O88987 864 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cbx2P30658 519 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hsf2P38533 535 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ruvbl1P60122 456 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pfkfb2P70265 519 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hhla1Q3TYV2 514 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ggt1Q60928 568 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Hbs1lQ69ZS7 682 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sytl5Q80T23 753 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Qsox1Q8BND5 748 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fignl1Q8BPY9 683 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lrrc4cQ8C031 640 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Eipr1Q8K0G5 386 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn1r24Q8R2D6 296 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ankrd61Q9CQM6 421 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dnase1l1Q9D7J6 314 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ern2Q9Z2E3 911 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Usp32F8VPZ3 1604 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PtprtQ99M80 1454 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Amd2D3Z6H8 334 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nkx1-1G3UXB3 402 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr738L7N1X7 311 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 LatO54957 242 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Amd1P0DMN7 334 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lamp1P11438 406 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Acvr2bP27040 536 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Stat5aP42230 793 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms