RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 IL23AQ9NPF7 189 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CACNA2D2Q9NY47 1150 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 GMIPQ9P107 970 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PCDHGB4Q9UN71 923 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PCDHGB5Q9Y5G0 923 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 FADS3Q9Y5Q0 445 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TDRD15B5MCY1 1934 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP6AP2A0A1C7CYW4 349 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 BOLA2-SMG1P6H3BVE0 249 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 GNGT2O14610 69 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 GRID2O43424 1007 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ATP6AP2O75787 350 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 LDLRP01130 860 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CCNA2P20248 432 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 NMBRP28336 390 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TUFMP49411 452 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 NDST2P52849 883 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 BNIP2Q12982 314 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PDCD4Q53EL6 469 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 C10orf120Q5SQS8 335 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TMTC4Q5T4D3 741 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PM20D1Q6GTS8 502 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CUZD1Q86UP6 607 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ZBTB46Q86UZ6 589 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ZC3HC1Q86WB0 502 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PACRGLQ8N7B6 248 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM102Q8N9M5 508 aaPredicted RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 STYXQ8WUJ0 223 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TUBGCP3Q96CW5 907 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 RBM38Q9H0Z9 239 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 GBA3Q9H227 469 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CWH43Q9H720 699 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 NMUR1Q9HB89 426 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 BLOC1S6Q9UL45 172 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 NDUFAF1Q9Y375 327 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TSC22D4Q9Y3Q8 395 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PCDHGA11Q9Y5H2 935 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 SNX10Q9Y5X0 201 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 V9GYQ6 96 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM149AA5PLN7 773 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 KPNA4O00629 521 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PMPCBO75439 489 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF26P17031 533 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CD53P19397 219 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PCYT1AP49585 367 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ACADVLP49748 655 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 EIF2B2P49770 351 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 KCNK10P57789 538 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 FPGSQ05932 587 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MERTKQ12866 999 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ITGADQ13349 1161 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 NFYCQ13952 458 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF460Q14592 562 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF829Q3KNS6 432 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CHSY3Q70JA7 882 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TMEM135Q86UB9 458 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM169BQ8N8A8 192 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MAGEE2Q8TD90 523 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TRIM63Q969Q1 353 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 C8orf48Q96LL4 319 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 FICDQ9BVA6 458 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ANKRD60Q9BZ19 345 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CCDC90BQ9GZT6 254 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF510Q9Y2H8 683 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 WDR37Q9Y2I8 494 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 RAD54BQ9Y620 910 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 USP3Q9Y6I4 520 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 C7orf72A4D263 438 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TCAF2A6NFQ2 919 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 BBIP1A8MTZ0 92 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SDHDO14521 159 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC4A1P02730 911 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 C8BP07358 591 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CCR1P32246 355 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MAGEA11P43364 429 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 GEMP55040 296 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PRKCQQ04759 706 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SMARCB1Q12824 385 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ERMP1Q7Z2K6 904 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SPPL2CQ8IUH8 684 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CRIPAKQ8N1N5 446 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MIER2Q8N344 545 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 OSCP1Q8WVF1 389 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 DPF3Q92784 378 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ABHD8Q96I13 439 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 CELF6Q96J87 481 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 PPP1R2P1Q96PQ5 205 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 C8orf4Q9NR00 106 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 TLR8Q9NR97 1041 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 MRPL17Q9NRX2 175 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 ATAD3AQ9NVI7 634 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 OR12D3Q9UGF7 316 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 EBF1Q9UH73 591 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 DAPK2Q9UIK4 370 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 FBXW11Q9UKB1 542 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 SCN5AQ14524 2016 aa6.95□□□□□ -1.3
SRGAP3-213ENST00000618999 VSTM5A8MXK1 200 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms