RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
COL4A3BP-207ENST00000604926 AAR2Q9Y312 384 aaKnown RBP5.8□□□□□ -1.48
COL4A3BP-207ENST00000604926 RIPK3Q9Y572 518 aa5.8□□□□□ -1.48
COL4A3BP-207ENST00000604926 WRBO00258 174 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 POLRMTO00411 1230 aaKnown RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 STX16O14662 325 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TSPAN4O14817 238 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 AIM2O14862 343 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 VILLO15195 856 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 PPM1DO15297 605 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 COCHO43405 550 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 UGDHO60701 494 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 RSL1D1O76021 490 aaKnown RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TNFRSF6BO95407 300 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 GP1BAP07359 652 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 MX1P20591 662 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 DDCP20711 480 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CDC25BP30305 580 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 SPAM1P38567 509 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACTBP60709 375 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACTA2P62736 377 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACTG1P63261 375 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACTG2P63267 376 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACTC1P68032 377 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACTA1P68133 377 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 SRSF5Q13243 272 aaKnown RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 NHSL2Q5HYW2 709 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CCNJQ5T5M9 372 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ACAD10Q6JQN1 1059 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 FBXO11Q86XK2 927 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CATSPERDQ86XM0 798 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 KLBQ86Z14 1044 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 PPM1KQ8N3J5 372 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 RDH13Q8NBN7 331 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 BHLHE23Q8NDY6 225 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 WDR48Q8TAF3 677 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 SNX29Q8TEQ0 813 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 KCNE4Q8WWG9 221 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TRIB2Q92519 343 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 POLDIP3Q9BY77 421 aaKnown RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ZYG11BQ9C0D3 744 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 BRF2Q9HAW0 419 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 NGBQ9NPG2 151 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 GSN-AS1Q9NRJ2 163 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 C19orf12Q9NSK7 152 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 FBXO34Q9NWN3 711 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 C14orf119Q9NWQ9 140 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ELOVL2Q9NXB9 296 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TRPC4Q9UBN4 977 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CNTNAP2Q9UHC6 1331 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ARHGEF35A5YM69 484 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CCDC188H7C350 402 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 PLK4O00444 970 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 GMDSO60547 372 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 DTNBO60941 627 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 APOA1P02647 267 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 OCM2P0CE71 109 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 OCMP0CE72 109 aaPredicted RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ENO3P13929 434 aaPredicted RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 MSX1P28360 303 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 EPHB2P29323 1055 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TALDO1P37837 337 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CLDN8P56748 225 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TAS2R60P59551 318 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 SIGLEC14Q08ET2 396 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 PUM1Q14671 1186 aaKnown RBP eCLIP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ARID5BQ14865 1188 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 IRF4Q15306 451 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 FSCN1Q16658 493 aaKnown RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 BTBD16Q32M84 506 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 NIPAL1Q6NVV3 410 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 HEATR3Q7Z4Q2 680 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 RCBTB1Q8NDN9 531 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 C17orf47Q8NEP4 570 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 PIGKQ92643 395 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 FBXW5Q969U6 566 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 NTAN1Q96AB6 310 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 DPYSL5Q9BPU6 564 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 KCNS3Q9BQ31 491 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 ASB8Q9H765 288 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 MPP6Q9NZW5 540 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 CTTNBP2NLQ9P2B4 639 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 IGSF9Q9P2J2 1179 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 TSPAN16Q9UKR8 245 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 NCKAP1Q9Y2A7 1128 aa5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 WBP11Q9Y2W2 641 aaKnown RBP5.79□□□□□ -1.48
COL4A3BP-207ENST00000604926 SLC15A5A6NIM6 579 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 SMIM23A6NLE4 172 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 SOBPA7XYQ1 873 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 MEI4A8MW99 385 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 TCP11X1B4DZS4 312 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 PTGES3LE9PB15 166 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 H3BNC9 293 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 RBAK-RBAKDNI3L0D1 243 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 EIF1AYO14602 144 aaKnown RBP5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 SLC31A2O15432 143 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 GAS2O43903 313 aaKnown RBP5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 DFNA5O60443 496 aa5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 EIF1BO60739 113 aaKnown RBP5.78□□□□□ -1.48
COL4A3BP-207ENST00000604926 MED6O75586 246 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms