RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 FIBCD1Q8N539 461 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 TRIML2Q8N7C3 387 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 TSPAN14Q8NG11 270 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 ZNF420Q8TAQ5 688 aaPredicted RBP9.61□□□□□ -0.87
LINC01539-201ENST00000587904 C17orf80Q9BSJ5 609 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 MCMBPQ9BTE3 642 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 TSSK1BQ9BXA7 367 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 HOXD1Q9GZZ0 328 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 SIRPGQ9P1W8 387 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 CFL2Q9Y281 166 aa9.61□□□□□ -0.87
LINC01539-201ENST00000587904 ZFP37Q9Y6Q3 630 aaPredicted RBP9.61□□□□□ -0.87
LINC01539-201ENST00000587904 PTPRSQ13332 1948 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ARPC4-TTLL3A0A0A6YYG9 625 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 H3BNC9 293 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ZNF254O75437 659 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 GMNNO75496 209 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 BMP10O95393 424 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CRTAMO95727 393 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 EPOP01588 193 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 MMP2P08253 660 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 PFKLP17858 780 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 HLA-DPA1P20036 260 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 NMBRP28336 390 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 HOXD9P28356 352 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 PKLRP30613 574 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 NUDT1P36639 197 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ACVRL1P37023 503 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CD86P42081 329 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 SERPINH1P50454 418 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ZBTB16Q05516 673 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ZNF177Q13360 481 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 POU6F1Q14863 301 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 NPTX1Q15818 432 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 C6orf10Q5SRN2 563 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CCNJQ5T5M9 372 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 KIAA0408Q6ZU52 694 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CCDC149Q6ZUS6 474 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ADAMTSL2Q86TH1 951 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 GALNT4Q8N4A0 578 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ARRDC2Q8TBH0 407 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CLP1Q92989 425 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 DCUN1D1Q96GG9 259 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 FEM1CQ96JP0 617 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 VPS35Q96QK1 796 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 COQ7Q99807 217 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 SLC13A1Q9BZW2 595 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 RHOJQ9H4E5 214 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 NPHS2Q9NP85 383 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 SNX15Q9NRS6 342 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TREX1Q9NSU2 369 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 SLC17A6Q9P2U8 582 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 HEMK1Q9Y5R4 338 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 COMMD10Q9Y6G5 202 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TYW5A2RUC4 315 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TRIM64BA6NI03 449 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ACOX3O15254 700 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 KDELR3O43731 214 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CCNT2O60583 730 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 GPC4O75487 556 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 FGF18O76093 207 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 F11P03951 625 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 FGF1P05230 155 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 BPGMP07738 259 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 MBL2P11226 248 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CFL1P23528 166 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TYK2P29597 1187 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 STX1BP61266 288 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TAGLNQ01995 201 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 DSC2Q02487 901 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 FSTL4Q6MZW2 842 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 RNF111Q6ZNA4 994 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 DGLUCYQ7Z3D6 616 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 TMCO2Q7Z6W1 182 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 GALNT7Q86SF2 657 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 MYEOVQ96EZ4 313 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 KLHL5Q96PQ7 755 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 GPR22Q99680 433 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 SLC2A11Q9BYW1 496 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 CLPBQ9H078 707 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 LIN28AQ9H9Z2 209 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 IARS2Q9NSE4 1012 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 STMN3Q9NZ72 180 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 UBA2Q9UBT2 640 aaPredicted RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 MID2Q9UJV3 735 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 AGO1Q9UL18 857 aaKnown RBP9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ANKRD6Q9Y2G4 727 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 INSL6Q9Y581 213 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 AP4B1Q9Y6B7 739 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 ANAPC1Q9H1A4 1944 aa9.6□□□□□ -0.87
LINC01539-201ENST00000587904 OBSL1O75147 1896 aa9.59□□□□□ -0.87
LINC01539-201ENST00000587904 LOC285095A0A1B0GVY8 99 aa9.59□□□□□ -0.87
LINC01539-201ENST00000587904 WDR91A4D1P6 747 aa9.59□□□□□ -0.87
LINC01539-201ENST00000587904 C2orf78A6NCI8 922 aa9.59□□□□□ -0.87
LINC01539-201ENST00000587904 H0YC42 278 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms