RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SERINC5Q86VE9 423 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 C2orf69Q8N8R5 385 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 OR56A4Q8NGH8 313 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 BLOC1S5Q8TDH9 187 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 C12orf43Q96C57 262 aaKnown RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 LRRC3Q9BY71 257 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 PALMDQ9NP74 551 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 TBC1D23Q9NUY8 699 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 NLE1Q9NVX2 485 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 IRAK4Q9NWZ3 460 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 GMIPQ9P107 970 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 ARIH1Q9Y4X5 557 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 COMMD10Q9Y6G5 202 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 OAS3Q9Y6K5 1087 aaKnown RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 TRIM64BA6NI03 449 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 POMCP01189 267 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 MAGEA11P43364 429 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 HLCSP50747 726 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 KPNA1P52294 538 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 POLR2JP52435 117 aaKnown RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 CDH15P55291 814 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 MGAT3Q09327 533 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 GRSF1Q12849 480 aaKnown RBP eCLIP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 EPS8Q12929 822 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 TUBA3CQ13748 450 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 CAPRIN1Q14444 709 aaKnown RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 SCN4BQ8IWT1 228 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 DPP10Q8N608 796 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 SNX31Q8N9S9 440 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 PDPRQ8NCN5 879 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 BORCS5Q969J3 196 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 ITFG2Q969R8 447 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 NRBF2Q96F24 287 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 OR51F1A6NGY5 319 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 CBFA2T3O75081 653 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 CHRNA1P02708 482 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 AKR1A1P14550 325 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 NELFEP18615 380 aaKnown RBP18.45■□□□□ 0.54
DDX39A-206ENST00000587730 CES1P23141 567 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 EMX2Q04743 252 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 RING1Q06587 406 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 TMED1Q13445 227 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 CRY1Q16526 586 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 KLHL35Q6PF15 583 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 GALNT13Q8IUC8 556 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 THAP11Q96EK4 314 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 LRCH3Q96II8 777 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 PCDHB3Q9Y5E6 796 aa18.45■□□□□ 0.54
DDX39A-206ENST00000587730 PTPRDP23468 1912 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 H3BMM5 538 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 EI24O14681 340 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 DUSP11O75319 330 aaKnown RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 DEAF1O75398 565 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 VPS26AO75436 327 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 NDUFS3O75489 264 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 OAZ2O95190 189 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 HPRP00739 348 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 GNAO1P09471 354 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 CDH1P12830 882 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 OXTRP30559 389 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 GALK1P51570 392 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 FOXA1P55317 472 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 PRKG2Q13237 762 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 DSC3Q14574 896 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ALFQ53S48 1182 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 CYBRD1Q53TN4 286 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ZNF554Q86TJ5 538 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 HID1Q8IV36 788 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 PGBD5Q8N414 524 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 GRIN3AQ8TCU5 1115 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 CDKN2AIPNLQ96HQ2 116 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 VPS50Q96JG6 964 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 MAGED4Q96JG8 741 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 NSMCE2Q96MF7 247 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 COMMD8Q9NX08 183 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 IL37Q9NZH6 218 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 AP3M1Q9Y2T2 418 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 KCTD3Q9Y597 815 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 MIA3Q5JRA6 1907 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 GMNNO75496 209 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ECI2O75521 394 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ALBP02768 609 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 JUNBP17275 347 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 TMBIM6P55061 237 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 HUNKP57058 714 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ADARB1P78563 741 aaKnown RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ZNF829Q3KNS6 432 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 PAN2Q504Q3 1202 aaKnown RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 SLC39A12Q504Y0 691 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 FBXL22Q6P050 247 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ZNF382Q96SR6 550 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 DNAAF2Q9NVR5 837 aaKnown RBP18.44■□□□□ 0.54
DDX39A-206ENST00000587730 FLRT1Q9NZU1 646 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 BTRCQ9Y297 605 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 ARL5AQ9Y689 179 aa18.44■□□□□ 0.54
DDX39A-206ENST00000587730 FAM92AA1XBS5 289 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 FAM149AA5PLN7 773 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 GOLGA8CPA6NN73 597 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 TMEM189-UBE2V1I3L0A0 370 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms