RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PALM2Q8IXS6 379 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 NXPE1Q8N323 547 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 MYRIPQ8NFW9 859 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ZNF398Q8TD17 642 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CAVIN3Q969G5 261 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CERS2Q96G23 380 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 FCRL3Q96P31 734 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 FAM167BQ9BTA0 163 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 SPATA16Q9BXB7 569 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 PARD6BQ9BYG5 372 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ZCCHC2Q9C0B9 1178 aaKnown RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ASB8Q9H765 288 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 RMI1Q9H9A7 625 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ERVMER34-1Q9H9K5 563 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 TM9SF3Q9HD45 589 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 BPIFA1Q9NP55 256 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 MBNL1Q9NR56 388 aaKnown RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 NSMCE4AQ9NXX6 385 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 SLC2A6Q9UGQ3 507 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CD84Q9UIB8 345 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 RAB23Q9ULC3 237 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CCDC151A5D8V7 595 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 KLHL33A6NCF5 533 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 POM121BA6NF01 834 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 K7ESM1 405 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 CACNB4O00305 520 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 QSOX1O00391 747 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 VEGFDO43915 354 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 LRP3O75074 770 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 BANF1O75531 89 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 GOT2P00505 430 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 PCCBP05166 539 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 ITPKAP23677 461 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 ACRV1P26436 265 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 HTR1BP28222 390 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 STX2P32856 288 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 PHBP35232 272 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 DHPSP49366 369 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 NAB1Q13506 487 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 PTPRCAPQ14761 206 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 NFATC4Q14934 902 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 DUOXA1Q1HG43 343 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 FASTKD1Q53R41 847 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 NEPROQ6NW34 567 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 C3orf62Q6ZUJ4 267 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 KCNMB4Q86W47 210 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SLC26A11Q86WA9 606 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 CILP2Q8IUL8 1156 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 RGL4Q8IZJ4 473 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 OXR1Q8N573 874 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SUMF1Q8NBK3 374 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 PLA2G15Q8NCC3 412 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 AENQ8WTP8 325 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SNX19Q92543 992 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 KLK6Q92876 244 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 FUBP1Q96AE4 644 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SCARF2Q96GP6 870 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 ZNF514Q96K75 400 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SLC6A18Q96N87 628 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 AGAP2Q99490 1192 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 APOOQ9BUR5 198 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 ZDHHC5Q9C0B5 715 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 CDC42EP4Q9H3Q1 356 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 TRIM39Q9HCM9 518 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 FZD3Q9NPG1 666 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 CATSPERZQ9NTU4 200 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 INTS10Q9NVR2 710 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 CNOT6Q9ULM6 557 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SMG5Q9UPR3 1016 aaKnown RBP10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SLC17A4Q9Y2C5 497 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 HCN4Q9Y3Q4 1203 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 R4GN57 208 aa10.31□□□□□ -0.76
CCDC47-203ENST00000580986 SPTY2D1-AS1A0A0U1RR47 76 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 TCRBV9S1A1TA0A576 114 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 FAM159BA6NKW6 160 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CFAP99D6REC4 459 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 F8W8V4 182 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 TLR4O00206 839 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 CD3EAPO15446 510 aaKnown RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 DFNA5O60443 496 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 SLC25A14O95258 325 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 C1QAP02745 245 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 RETP07949 1114 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 GSTM1P09488 218 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 RALBP11234 206 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 NSG1P42857 185 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 PMS2P54278 862 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 GPX6P59796 221 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 GSTM4Q03013 218 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 MGAT5Q09328 741 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 THOC5Q13769 683 aaKnown RBP10.3□□□□□ -0.76
CCDC47-203ENST00000580986 BRD3Q15059 726 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 ZRANB3Q5FWF4 1079 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 GPRC6AQ5T6X5 926 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 ALS2CLQ60I27 953 aa10.3□□□□□ -0.76
CCDC47-203ENST00000580986 PSAPL1Q6NUJ1 521 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms