RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 MTA2O94776 668 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 SOD1P00441 154 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 C9P02748 559 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ATP1A1P05023 1023 aaKnown RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 RNF224P0DH78 156 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 FGF5P12034 268 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 CA4P22748 312 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 MAXP61244 160 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 SH3BP2P78314 561 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 PDE1BQ01064 536 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ITKQ08881 620 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 MRPL49Q13405 166 aaKnown RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 ELOAQ14241 798 aaKnown RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 NAA30Q147X3 362 aaPredicted RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 UGT8Q16880 541 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNS-208ENST00000574218 FKBP15Q5T1M5 1219 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 MON1BQ7L1V2 547 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 NLRP8Q86W28 1048 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 HPS6Q86YV9 775 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 NPWQ8N729 165 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 MOCOSQ96EN8 888 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ZDHHC12Q96GR4 267 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 COX14Q96I36 57 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 NSMCE3Q96MG7 304 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 PCMTD1Q96MG8 357 aaPredicted RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 C5orf34Q96MH7 638 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 KCTD15Q96SI1 283 aaPredicted RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 PCDHB18PQ96TA0 734 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 MGME1Q9BQP7 344 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 SNRNP25Q9BV90 132 aaKnown RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 RIOK2Q9BVS4 552 aaKnown RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 GPR87Q9BY21 358 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 BRD8Q9H0E9 1235 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 GANQ9H2C0 597 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ZNF768Q9H5H4 540 aaKnown RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 ZWILCHQ9H900 591 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 UCK1Q9HA47 277 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 FAM207AQ9NSI2 230 aaPredicted RBP11.79□□□□□ -0.52
CTNS-208ENST00000574218 HAUS2Q9NVX0 235 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 PCSK1NQ9UHG2 260 aa11.79□□□□□ -0.52
CTNS-208ENST00000574218 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
CTNS-208ENST00000574218 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 H3BRJ5 948 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 GRID2O43424 1007 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 DNAJC6O75061 913 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
CTNS-208ENST00000574218 SORBS2O94875 1100 aaKnown RBP11.78□□□□□ -0.52
CTNS-208ENST00000574218 TNFAIP3P21580 790 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 ELAVL4P26378 380 aaKnown RBP11.78□□□□□ -0.52
CTNS-208ENST00000574218 EEF1GP26641 437 aaKnown RBP11.78□□□□□ -0.52
CTNS-208ENST00000574218 ARL4AP40617 200 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 MMP13P45452 471 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 CHAF1BQ13112 559 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 CA9Q16790 459 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 MARC1Q5VT66 337 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 CPZQ66K79 652 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 RFLNAQ6ZTI6 216 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 TMEM26Q6ZUK4 368 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 SYVN1Q86TM6 617 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 SRRM1Q8IYB3 904 aaKnown RBP11.78□□□□□ -0.52
CTNS-208ENST00000574218 AGAP2Q99490 1192 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 TAB2Q9NYJ8 693 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 LUZP4Q9P127 313 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 RARRES3Q9UL19 164 aa11.78□□□□□ -0.52
CTNS-208ENST00000574218 A0A0J9YYE9 177 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 GOLGA6L3A6NEY3 463 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PDZK1P1A8MUH7 402 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 TRBC1P01850 177 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PTPN4P29074 926 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 SERPINB6P35237 376 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.53
CTNS-208ENST00000574218 ARL4DP49703 201 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 STC1P52823 247 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 CDH6P55285 790 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 RIPPLY3P57055 190 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 JAM2P57087 298 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PTSQ03393 145 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PTPRRQ15256 657 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 INSCQ1MX18 579 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 TCP11X2Q5H9J9 407 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 IRGCQ6NXR0 463 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PPP1R2P3Q6NXS1 205 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 FAM92BQ6ZTR7 304 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PRSS42Q7Z5A4 293 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 TICAM1Q8IUC6 712 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PSTKQ8IV42 348 aaKnown RBP11.77□□□□□ -0.53
CTNS-208ENST00000574218 RHOT1Q8IXI2 618 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PGBD5Q8N414 524 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 SIDT2Q8NBJ9 832 aaKnown RBP11.77□□□□□ -0.53
CTNS-208ENST00000574218 PIH1D2Q8WWB5 315 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 MFRPQ9BY79 579 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 ING2Q9H160 280 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 CARD9Q9H257 536 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 NT5MQ9NPB1 228 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms