RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 KCND3Q9UK17 655 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 CNOT6Q9ULM6 557 aaKnown RBP19.62■□□□□ 0.73
CCDC40-206ENST00000572083 CENPEQ02224 2701 aa19.62■□□□□ 0.73
CCDC40-206ENST00000572083 RP1L1Q8IWN7 2480 aaPredicted RBP19.62■□□□□ 0.73
CCDC40-206ENST00000572083 PIPSLA2A3N6 862 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 TMEM191CA6NGB0 347 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 CREG1O75629 220 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 CLDN7O95471 211 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 CASP14P31944 242 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 ARL4AP40617 200 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 CDH6P55285 790 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 UBE2IP63279 158 aaKnown RBP19.61■□□□□ 0.73
CCDC40-206ENST00000572083 ITKQ08881 620 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 PHYKPLQ8IUZ5 450 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 HSPH1Q92598 858 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 OSGEPL1Q9H4B0 414 aa19.61■□□□□ 0.73
CCDC40-206ENST00000572083 PRRC2CQ9Y520 2896 aaKnown RBP19.61■□□□□ 0.73
CCDC40-206ENST00000572083 FADS2P1A8MWK0 482 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 RASSF9O75901 435 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 TCF4P15884 667 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 IL1R2P27930 398 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 LEPRP48357 1165 aaKnown RBP19.6■□□□□ 0.73
CCDC40-206ENST00000572083 DNASE1L3Q13609 305 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 DPYSL2Q16555 572 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 POLNQ7Z5Q5 900 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 ENOX1Q8TC92 643 aaKnown RBP19.6■□□□□ 0.73
CCDC40-206ENST00000572083 CSPG4P5Q96PW8 444 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 PLEKHG4BQ96PX9 1271 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 WDR24Q96S15 920 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 NUP62CLQ9H1M0 184 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 ARFGAP3Q9NP61 516 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 SCHIP1Q9P0W5 487 aaPredicted RBP19.6■□□□□ 0.73
CCDC40-206ENST00000572083 SLC30A1Q9Y6M5 507 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 CRYBG3Q68DQ2 2970 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 CREBBPQ92793 2442 aa19.6■□□□□ 0.73
CCDC40-206ENST00000572083 OR5K4A6NMS3 321 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 GRID2O43424 1007 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 UBXN7O94888 489 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 FERP16591 822 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 GARSP41250 739 aaKnown RBP19.59■□□□□ 0.73
CCDC40-206ENST00000572083 SEMA5AQ13591 1074 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 IHHQ14623 411 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 NADK2Q4G0N4 442 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 HENMT1Q5T8I9 393 aaKnown RBP19.59■□□□□ 0.73
CCDC40-206ENST00000572083 CPZQ66K79 652 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 APLFQ8IW19 511 aaPredicted RBP19.59■□□□□ 0.73
CCDC40-206ENST00000572083 CT55Q8WUE5 264 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 SYT11Q9BT88 431 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 POLR1EQ9GZS1 481 aaKnown RBP19.59■□□□□ 0.73
CCDC40-206ENST00000572083 ACTL8Q9H568 366 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 ZNF768Q9H5H4 540 aaKnown RBP19.59■□□□□ 0.73
CCDC40-206ENST00000572083 KLC4Q9NSK0 619 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCDC40-206ENST00000572083 FANCLQ9NW38 375 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 CHKBQ9Y259 395 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 PCDHGA6Q9Y5G7 932 aa19.59■□□□□ 0.73
CCDC40-206ENST00000572083 CELSR2Q9HCU4 2923 aa19.58■□□□□ 0.73
CCDC40-206ENST00000572083 CSMD1Q96PZ7 3565 aa19.58■□□□□ 0.73
CCDC40-206ENST00000572083 KIF1CO43896 1103 aaKnown RBP19.58■□□□□ 0.72
CCDC40-206ENST00000572083 SPAG6O75602 509 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 CCNYL3P0C7X3 344 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 AMD1P17707 334 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 DSC2Q02487 901 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 UBXN1Q04323 297 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 CHAF1BQ13112 559 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 IL11RAQ14626 422 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 PLA2G4EQ3MJ16 856 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 CT47A1Q5JQC4 288 aaPredicted RBP19.58■□□□□ 0.72
CCDC40-206ENST00000572083 TMEM26Q6ZUK4 368 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 TRIM48Q8IWZ4 208 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 AVL9Q8NBF6 648 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 RSC1A1Q92681 617 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 RUFY1Q96T51 708 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 TDRD1Q9BXT4 1180 aaKnown RBP19.58■□□□□ 0.72
CCDC40-206ENST00000572083 RMI1Q9H9A7 625 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 DNPEPQ9ULA0 475 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 TTLL3Q9Y4R7 772 aa19.58■□□□□ 0.72
CCDC40-206ENST00000572083 C1orf232A0A0U1RR37 186 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 ENO4A6NNW6 628 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 LGALS16A8MUM7 142 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 NUAK1O60285 661 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 TIAF1O95411 115 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 FGF5P12034 268 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 ATP1A3P13637 1013 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 SERPINB6P35237 376 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 PGDP52209 483 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 RPS18P62269 152 aaKnown RBP19.57■□□□□ 0.72
CCDC40-206ENST00000572083 SEPT7Q16181 437 aaKnown RBP19.57■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF648Q5T619 568 aaPredicted RBP19.57■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF787Q6DD87 383 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 TEX26Q8N6G2 289 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 LPCAT1Q8NF37 534 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 CARD9Q9H257 536 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 UCK1Q9HA47 277 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 LHX9Q9NQ69 397 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 ATXN10Q9UBB4 475 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 PADI1Q9ULC6 663 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 SHANK1Q9Y566 2161 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 LRBAP50851 2863 aa19.57■□□□□ 0.72
CCDC40-206ENST00000572083 GOLGA6L3A6NEY3 463 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms