RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 POLR1BQ9H9Y6 1135 aa15.33■□□□□ 0.04
CCDC113-203ENST00000561517 TRIM39Q9HCM9 518 aa15.33■□□□□ 0.04
CCDC113-203ENST00000561517 ATXN10Q9UBB4 475 aa15.33■□□□□ 0.04
CCDC113-203ENST00000561517 ZNHIT2Q9UHR6 403 aa15.33■□□□□ 0.04
CCDC113-203ENST00000561517 AAR2Q9Y312 384 aaKnown RBP15.33■□□□□ 0.04
CCDC113-203ENST00000561517 A0A1W2PNU3 283 aaPredicted RBP15.32■□□□□ 0.04
CCDC113-203ENST00000561517 TCRBV7S2A1N4TA0A589 114 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 GPR89AB7ZAQ6 455 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 D6RAR5 112 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 DXOO77932 396 aaKnown RBP15.32■□□□□ 0.04
CCDC113-203ENST00000561517 ECEL1O95672 775 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 AGTP01019 485 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 RPLP0P05388 317 aaKnown RBP15.32■□□□□ 0.04
CCDC113-203ENST00000561517 GPR89BP0CG08 455 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 B4GALNT1Q00973 533 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 ZDHHC20Q5W0Z9 365 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 IGF2-ASQ6U949 168 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 SPRED1Q7Z699 444 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 ADGRG6Q86SQ4 1221 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 ARL14Q8N4G2 192 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 BLOC1S5Q8TDH9 187 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 ATXN7L3BQ96GX2 97 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 PPP1R2P1Q96PQ5 205 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 VPS35Q96QK1 796 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 FICDQ9BVA6 458 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 BPIFA1Q9NP55 256 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 IL26Q9NPH9 171 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC113-203ENST00000561517 TMPRSS11EQ9UL52 423 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 R3HDM2Q9Y2K5 976 aaKnown RBP15.32■□□□□ 0.04
CCDC113-203ENST00000561517 PIKFYVEQ9Y2I7 2098 aa15.32■□□□□ 0.04
CCDC113-203ENST00000561517 CHUKO15111 745 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 GRID2O43424 1007 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 TLX3O43711 291 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 MPOP05164 745 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 PTMAP06454 111 aaKnown RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 ZNF8P17098 575 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 GABREP78334 506 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 CCZ1BP86790 482 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 CCZ1P86791 482 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 MSLNQ13421 630 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 PRPSAP1Q14558 356 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 TBC1D25Q3MII6 688 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 CHST15Q7LFX5 561 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 GLT6D1Q7Z4J2 308 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 PHYKPLQ8IUZ5 450 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 LSMEM2Q8N112 164 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 Q8N9G6 341 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 SNIP1Q8TAD8 396 aaKnown RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 LIN37Q96GY3 246 aaPredicted RBP15.31■□□□□ 0.04
CCDC113-203ENST00000561517 OR2AG1Q9H205 316 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 SYNDIG1Q9H7V2 258 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 ARFGAP3Q9NP61 516 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 PRKAB1Q9Y478 270 aa15.31■□□□□ 0.04
CCDC113-203ENST00000561517 A0A087WV48 116 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 RHPN2P1A8MT19 583 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 B4GAT1O43505 415 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 VEGFDO43915 354 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 CCDC175P0C221 793 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 CCKBRP32239 447 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 ACTN2P35609 894 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 SPAM1P38567 509 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 GPR3P46089 330 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 CLCNKAP51800 687 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 OLIG2Q13516 323 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 ATP13A5Q4VNC0 1218 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 ZNF648Q5T619 568 aaPredicted RBP15.3■□□□□ 0.04
CCDC113-203ENST00000561517 SEL1L2Q5TEA6 688 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 MEI1Q5TIA1 1274 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 CFAP47Q6ZTR5 3102 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 B3GNT8Q7Z7M8 397 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 SFRP1Q8N474 314 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 FAM71DQ8N9W8 422 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 FGF11Q92914 225 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 PRR11Q96HE9 360 aaPredicted RBP15.3■□□□□ 0.04
CCDC113-203ENST00000561517 ARNT2Q9HBZ2 717 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 SATB2Q9UPW6 733 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 PCDHGA8Q9Y5G5 932 aa15.3■□□□□ 0.04
CCDC113-203ENST00000561517 CCDC187A0A096LP49 1063 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 A6NCN8 305 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 TMX2-CTNND1H3BSU7 103 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 GAPDHSO14556 408 aaPredicted RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 PPM1DO15297 605 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 EML2O95834 649 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 ACP5P13686 325 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 EIF2S3P41091 472 aaKnown RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 FASLGP48023 281 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 GDF10P55107 478 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 ZFP36L1Q07352 338 aaKnown RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 TAF1AQ15573 450 aaPredicted RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 CLPPQ16740 277 aaPredicted RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 KHDC1Q4VXA5 237 aaKnown RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 C3orf38Q5JPI3 329 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 KCTD11Q693B1 232 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 DENND5AQ6IQ26 1287 aa15.29■□□□□ 0.04
CCDC113-203ENST00000561517 WDR36Q8NI36 951 aaKnown RBP15.29■□□□□ 0.04
CCDC113-203ENST00000561517 RTP4Q96DX8 246 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms