RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 FGF1P05230 155 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 PIRTP0C851 137 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 GPR89BP0CG08 455 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 PYGMP11217 842 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 HLA-DPA1P20036 260 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 AK4P27144 223 aaPredicted RBP11.14□□□□□ -0.63
BMP4-204ENST00000558961 RBL1P28749 1068 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 HMGCLP35914 325 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
BMP4-204ENST00000558961 LSSP48449 732 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 WNT3AP56704 352 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 CTBSQ01459 385 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 KLF1Q13351 362 aaPredicted RBP11.14□□□□□ -0.63
BMP4-204ENST00000558961 SPIDRQ14159 915 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 SLC1A5Q15758 541 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 DOK6Q6PKX4 331 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 PID1Q7Z2X4 250 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 SPRED1Q7Z699 444 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 CDKL3Q8IVW4 592 aaPredicted RBP11.14□□□□□ -0.63
BMP4-204ENST00000558961 LSMEM2Q8N112 164 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 NAGSQ8N159 534 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 TTC30BQ8N4P2 665 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 TRAM1L1Q8N609 369 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 UBL4BQ8N7F7 174 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 MNS1Q8NEH6 495 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 SPATA4Q8NEY3 305 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 DPEP2Q9H4A9 486 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 POLR1BQ9H9Y6 1135 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 HACD3Q9P035 362 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 TMEM98Q9Y2Y6 226 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 SPO11Q9Y5K1 396 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 PCYT1BQ9Y5K3 369 aaPredicted RBP11.14□□□□□ -0.63
BMP4-204ENST00000558961 AK5Q9Y6K8 562 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 RNF215Q9Y6U7 377 aa11.14□□□□□ -0.63
BMP4-204ENST00000558961 CTAGE15A4D2H0 777 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 AURKAO14965 403 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 TJP3O95049 919 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 MPOP05164 745 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CTAGE8P0CG41 777 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 RBP3P10745 1247 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 BPIP17213 487 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CCKBRP32239 447 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 ACTN2P35609 894 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 CETN2P41208 172 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CHRNA4P43681 627 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 FASLGP48023 281 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 ERVPABLB-1P60509 514 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 GABREP78334 506 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 SIRPB2Q5JXA9 342 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 ITPRIPL1Q6GPH6 555 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 KDELC2Q7Z4H8 507 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CTAGE6Q86UF2 777 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 GALNT13Q8IUC8 556 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CCNJLQ8IV13 435 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 CTAGE4Q8IX94 777 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 NOA1Q8NC60 698 aaKnown RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 ZDHHC1Q8WTX9 485 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 ATXN7L3BQ96GX2 97 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 PRR11Q96HE9 360 aaPredicted RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 CAPZA3Q96KX2 299 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 ZNF578Q96N58 590 aaPredicted RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 VPS35Q96QK1 796 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 GFM1Q96RP9 751 aaKnown RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 LRRN3Q9H3W5 708 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 SMARCAL1Q9NZC9 954 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 LRIT1Q9P2V4 623 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 SHOC2Q9UQ13 582 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 ITPR1Q14643 2758 aa11.13□□□□□ -0.63
BMP4-204ENST00000558961 DSPP15924 2871 aaKnown RBP11.13□□□□□ -0.63
BMP4-204ENST00000558961 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 UNC13CQ8NB66 2214 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 CCDC187A0A096LP49 1063 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 A6NCN8 305 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 PRR19A6NJB7 356 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 H7C0C1 242 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 PGRMC1O00264 195 aaKnown RBP11.12□□□□□ -0.63
BMP4-204ENST00000558961 CHUKO15111 745 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 NUAK1O60285 661 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 PPFIA2O75334 1257 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 ANXA9O76027 345 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 ECEL1O95672 775 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 RPLP0P05388 317 aaKnown RBP11.12□□□□□ -0.63
BMP4-204ENST00000558961 UQCRHP07919 91 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 ADRA1AP35348 466 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 ACTR1BP42025 376 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 GPR3P46089 330 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 ATP5OP48047 213 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 CLCNKAP51800 687 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 GEMP55040 296 aa11.12□□□□□ -0.63
BMP4-204ENST00000558961 MAZP56270 477 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms