RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ITGA1P56199 1179 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CCL7P80098 99 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 ZFP36L1Q07352 338 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 PPP3CAQ08209 521 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 FAPQ12884 760 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 STK4Q13043 487 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 EIF2B5Q13144 721 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 C1orf61Q13536 156 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 DRAP1Q14919 205 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 RABEP1Q15276 862 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CATSPEREQ5SY80 951 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 KRT39Q6A163 491 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 HIST2H2BCQ6DN03 193 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 KIAA1161Q6NSJ0 714 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 LVRNQ6Q4G3 990 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 LCLAT1Q6UWP7 414 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 BEND5Q7L4P6 421 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CHSY1Q86X52 802 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 LGI4Q8N135 537 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CCAR2Q8N163 923 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SDR16C5Q8N3Y7 309 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SH2D3CQ8N5H7 860 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 DTX3Q8N9I9 347 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 DQX1Q8TE96 717 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SLC35F5Q8WV83 523 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 ASB12Q8WXK4 309 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 ALG14Q96F25 216 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 PPP1R16AQ96I34 528 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 PPP1R13BQ96KQ4 1090 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 BTN2A3PQ96KV6 586 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CCDC114Q96M63 670 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CATSPER2Q96P56 530 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SLC13A1Q9BZW2 595 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 BLZF1Q9H2G9 400 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 LRRN3Q9H3W5 708 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SYNDIG1Q9H7V2 258 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 RAB20Q9NX57 234 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 ZFR2Q9UPR6 939 aaKnown RBP4.9□□□□□ -1.63
ATXN3-239ENST00000556315 PTPN13Q12923 2485 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 CKAP5Q14008 2032 aa4.9□□□□□ -1.63
ATXN3-239ENST00000556315 MYH11P35749 1972 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 A0A1W2PQM1 296 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 VPS37CA5D8V6 355 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 MROH6A6NGR9 719 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 KCNU1A8MYU2 1149 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 ALG1L2C9J202 215 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 D6RAR5 112 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 GOLGA6L22H0YM25 854 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 STMND1H3BQB6 276 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 O00370 1275 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 TOR1BO14657 336 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 RAD51BO15315 384 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 GPR39O43194 453 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 TSPAN6O43657 245 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 AP1G1O43747 822 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 STX10O60499 249 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PPP6R2O75170 966 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 AGFG2O95081 481 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 RPLP0P05388 317 aaKnown RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 FYNP06241 537 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 CTSLP07711 333 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 SLC2A3P11169 496 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 TSHRP16473 764 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 CDK11BP21127 795 aaKnown RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 CASP1P29466 404 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PSMC2P35998 433 aaKnown RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 ANP32AP39687 249 aaKnown RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 RECQLP46063 649 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 RGS7P49802 495 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 NEK3P51956 506 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 THOP1P52888 689 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 MAPK10P53779 464 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 RIPPLY3P57055 190 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 SESN3P58005 492 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PFN3P60673 137 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 YWHAEP62258 255 aaKnown RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 YPEL5P62699 121 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PHC1P78364 1004 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 KRT83P78385 493 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 TMPRSS15P98073 1019 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 CUL4BQ13620 913 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 FGL2Q14314 439 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 STK38Q15208 465 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 ELOCQ15369 112 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 CNGA2Q16280 664 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 RABGAP1LQ5R372 815 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 FHL5Q5TD97 284 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 FAXCQ5TGI0 409 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 CXorf57Q6NSI4 855 aaKnown RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 PMF1Q6P1K2 205 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 FAM173BQ6P4H8 233 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 FSTL5Q8N475 847 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-239ENST00000556315 ARL10Q8N8L6 244 aa4.89□□□□□ -1.63
ATXN3-239ENST00000556315 ATP6V0D2Q8N8Y2 350 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms