RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TACC1O75410 805 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 MTA2O94776 668 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 GALTP07902 379 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 UBL4AP11441 157 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 PSMA4P25789 261 aaKnown RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 ICAM3P32942 547 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 HARS2P49590 506 aaKnown RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 CLCNKAP51800 687 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 SERTAD4-AS1Q5TG53 156 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 TXNDC8Q6A555 127 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 TMED8Q6PL24 325 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 ASB18Q6ZVZ8 466 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 MOB3CQ70IA8 216 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 PCGF5Q86SE9 256 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 TADA2BQ86TJ2 420 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 DIS3L2Q8IYB7 885 aaKnown RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 FGFBP3Q8TAT2 258 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 KLHL29Q96CT2 875 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 STAMBPL1Q96FJ0 436 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 RBM4BQ9BQ04 359 aaKnown RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 SYT17Q9BSW7 474 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 VEZTQ9HBM0 779 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 SNTG1Q9NSN8 517 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 OLA1Q9NTK5 396 aaKnown RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 BLOC1S4Q9NUP1 217 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 ORC3Q9UBD5 711 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 CAMK2AQ9UQM7 478 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCFD1-218ENST00000556256 C2CD2Q9Y426 696 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 ZHX2Q9Y6X8 837 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 A3GALT2U3KPV4 340 aa3.03□□□□□ -1.92
SCFD1-218ENST00000556256 TEX13CA0A0J9YWL9 993 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 PGPEP1LA6NFU8 196 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 HSPB2A8KAH6 182 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 A8MU10 97 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 IFNL4K9M1U5 179 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 WDR1O75083 606 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 LAMP2P13473 410 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 ZNF8P17098 575 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 PTPN2P17706 415 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 EDN2P20800 178 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 CHMP24386 653 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 CHATP28329 748 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 ISL1P61371 349 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 RUNX1T1Q06455 604 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 GAGE5Q13069 117 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 GAGE6Q13070 117 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 GTF2H2Q13888 395 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 TBCEQ15813 527 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 HSPB2Q16082 182 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 MMEL1Q495T6 779 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 SNX30Q5VWJ9 437 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 GTF2H2CQ6P1K8 395 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 RRM2BQ7LG56 351 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 NOC3LQ8WTT2 800 aaKnown RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 UCMAQ8WVF2 138 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 SAAL1Q96ER3 474 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 SCRN2Q96FV2 425 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 PERPQ96FX8 193 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 KLHL15Q96M94 604 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 TREX2Q9BQ50 279 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 HEMGNQ9BXL5 484 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 TFB2MQ9H5Q4 396 aaKnown RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 UPF2Q9HAU5 1272 aaKnown RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 FGF22Q9HCT0 170 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 IRAK4Q9NWZ3 460 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 MAP3K20Q9NYL2 800 aaKnown RBP3.02□□□□□ -1.93
SCFD1-218ENST00000556256 RASAL2Q9UJF2 1139 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 OR2W1Q9Y3N9 320 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 PIAS3Q9Y6X2 628 aa3.02□□□□□ -1.93
SCFD1-218ENST00000556256 IGLV5-45A0A087WSX0 123 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 A0A1W2PQF6 199 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 PI4KAP2A4QPH2 592 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 E9PQ18 207 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 SH2B2O14492 632 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 PRKNO60260 465 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 SCGB1D1O95968 90 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CD58P19256 250 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CORO1AP31146 461 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 HOXC8P31273 242 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 BSGP35613 385 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CPOXP36551 454 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CASP2P42575 452 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 EIF3BP55884 814 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CLDN2P57739 230 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 RPL7AP62424 266 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 YWHAZP63104 245 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 EEF1A1P68104 462 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 LMOD3Q0VAK6 560 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 ITGA9Q13797 1035 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 RUNX2Q13950 521 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 KRT32Q14532 448 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 RNPS1Q15287 305 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 TAF11Q15544 211 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 EDRF1Q3B7T1 1238 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 EEF1A1P5Q5VTE0 462 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CCDC30Q5VVM6 783 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 MZT2BQ6NZ67 158 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 METTL7BQ6UX53 244 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms