RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ALDH4A1P30038 563 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 DDOSTP39656 456 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 HADHAP40939 763 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 AP2S1P53680 142 aaPredicted RBP15.58■□□□□ 0.08
SYNE3-203ENST00000554873 GJA9P57773 515 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 VBP1P61758 197 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 KYAT1Q16773 422 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 SPANXN3Q5MJ09 141 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 C6orf141Q5SZD1 244 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 UBE2Q1Q7Z7E8 422 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 CELF2-AS1Q8N7Q2 184 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 NDRG1Q92597 394 aaKnown RBP15.58■□□□□ 0.08
SYNE3-203ENST00000554873 ASPSCR1Q9BZE9 553 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 PRDM12Q9H4Q4 367 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 ZMAT5Q9UDW3 170 aaKnown RBP15.58■□□□□ 0.08
SYNE3-203ENST00000554873 FBXO5Q9UKT4 447 aa15.58■□□□□ 0.08
SYNE3-203ENST00000554873 NME4O00746 187 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 USP12O75317 370 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 HSD17B1P14061 328 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 CD68P34810 354 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 GLUD2P49448 558 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 LIMK2P53671 638 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 OR2B6P58173 313 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 LSM3P62310 102 aaKnown RBP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 PIGFQ07326 219 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 IMPG1Q17R60 797 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ZNF484Q5JVG2 852 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 GDPD3Q7L5L3 318 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 TBC1D21Q8IYX1 336 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 NAT16Q8N8M0 369 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 MFSD3Q96ES6 412 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 PLSCR3Q9NRY6 295 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 NAALAD2Q9Y3Q0 740 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 A0A1W2PQ72 361 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ZBBXA8MT70 800 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 UBDO15205 165 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 TRIM16O95361 564 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 C2P06681 752 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ARNTP27540 789 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 TOP3AQ13472 1001 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 GALNT3Q14435 633 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 PRPSAP1Q14558 356 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 CYP51A1Q16850 503 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ARHGAP17Q68EM7 881 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 TBPL2Q6SJ96 375 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 STRADAQ7RTN6 431 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 PID1Q7Z2X4 250 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 METTL4Q8N3J2 472 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 NXNL1Q96CM4 212 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ELMO2Q96JJ3 720 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ASB2Q96Q27 587 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 NODALQ96S42 347 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 RNF19AQ9NV58 838 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 PAK1IP1Q9NWT1 392 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ABI2Q9NYB9 513 aaPredicted RBP15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ERAP1Q9NZ08 941 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 ABCD2Q9UBJ2 740 aa15.57■□□□□ 0.08
SYNE3-203ENST00000554873 IFRD2Q12894 506 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 TARDBPQ13148 414 aaKnown RBP eCLIP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 TYSND1Q2T9J0 566 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 NT5DC4Q86YG4 428 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 APOBEC3FQ8IUX4 373 aaKnown RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 UBQLNLQ8IYU4 475 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 LINC01465Q8N7H1 131 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 PSD4Q8NDX1 1056 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 MCFD2Q8NI22 146 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 PIK3R3Q92569 461 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 ZNF669Q96BR6 464 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 OMA1Q96E52 524 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 ST6GAL2Q96JF0 529 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 C8orf48Q96LL4 319 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 MCM3APO60318 1980 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 C12orf71A8MTZ7 269 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 TMEM233B4DJY2 109 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 TK2O00142 265 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 USP2O75604 605 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 APOA1P02647 267 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 GLULP15104 373 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 HTR2BP41595 481 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 PITX1P78337 314 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 CCNA1P78396 465 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 GJC2Q5T442 439 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 PRMT9Q6P2P2 845 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 P2RY8Q86VZ1 359 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 PAPD5Q8NDF8 572 aaKnown RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 CHDHQ8NE62 594 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 FAM83FQ8NEG4 500 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 ACVR1CQ8NER5 493 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 SPPL2BQ8TCT7 592 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 SLC39A13Q96H72 371 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 GDF15Q99988 308 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 HOPXQ9BPY8 73 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 RHOBTB2Q9BYZ6 727 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 DNMT3LQ9UJW3 386 aa15.56■□□□□ 0.08
SYNE3-203ENST00000554873 ZNF638Q14966 1978 aaKnown RBP15.56■□□□□ 0.08
SYNE3-203ENST00000554873 A0A0G2JMP0 313 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms