RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ABCG8Q9H221 673 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 C10orf88Q9H8K7 445 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 USP29Q9HBJ7 922 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 LATS2Q9NRM7 1088 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 NLGN3Q9NZ94 848 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 FEZ2Q9UHY8 353 aaPredicted RBP8.3□□□□□ -1.08
PSEN1-209ENST00000553855 CD84Q9UIB8 345 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ANGPTL2Q9UKU9 493 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 SHOC2Q9UQ13 582 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PKP3Q9Y446 797 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF711Q9Y462 761 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 PCDH15Q96QU1 1955 aa8.3□□□□□ -1.08
PSEN1-209ENST00000553855 GOLGA6L10A0A0M3HER8 536 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TPP1O14773 563 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ATXN7O15265 892 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 STX7O15400 261 aaKnown RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ZW10O43264 779 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 EFSO43281 561 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 LIASO43766 372 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 PPFIA2O75334 1257 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 RFPL3O75679 317 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 CRTAMO95727 393 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 FGGP02679 453 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 PIRTP0C851 137 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 CKMT2P17540 419 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 PSMB4P28070 264 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TRIM23P36406 574 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 FDFT1P37268 417 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 SPINT3P49223 89 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 CDK3Q00526 305 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ILF3Q12906 894 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 EIF2B5Q13144 721 aaKnown RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 KLF1Q13351 362 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ILKQ13418 452 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 SHBQ15464 509 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 SLC1A5Q15758 541 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 PDPK2PQ6A1A2 396 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ZCCHC8Q6NZY4 707 aaKnown RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 DOK6Q6PKX4 331 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 LVRNQ6Q4G3 990 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 KDELC1Q6UW63 502 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ADAMTSL4Q6UY14 1074 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 C4orf22Q6V702 233 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TECPR1Q7Z6L1 1165 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TAF8Q7Z7C8 310 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 LINC00523Q86TU6 105 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 GALNT15Q8N3T1 639 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 GDAP1Q8TB36 358 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 SLC35B2Q8TB61 432 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 C1orf54Q8WWF1 131 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TSACCQ96A04 125 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 FUBP1Q96AE4 644 aaKnown RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 HIC2Q96JB3 615 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TTC25Q96NG3 672 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TRIB3Q96RU7 358 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TBL1YQ9BQ87 522 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TMEM121Q9BTD3 319 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ZSCAN5AQ9BUG6 496 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TEX101Q9BY14 249 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 GSDMCQ9BYG8 508 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 ABCG4Q9H172 646 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 SUDS3Q9H7L9 328 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 LRRC40Q9H9A6 602 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 CARS2Q9HA77 564 aaKnown RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 CYP4F12Q9HCS2 524 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 GPR27Q9NS67 375 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 TRMT1Q9NXH9 659 aaKnown RBP8.29□□□□□ -1.08
PSEN1-209ENST00000553855 PCDHGA1Q9Y5H4 931 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 PLXNA2O75051 1894 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 DCHS1Q96JQ0 3298 aa8.29□□□□□ -1.08
PSEN1-209ENST00000553855 SHROOM3Q8TF72 1996 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 MED19A0JLT2 244 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-209ENST00000553855 PRSS38A1L453 326 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 ERI2A8K979 691 aaKnown RBP8.28□□□□□ -1.08
PSEN1-209ENST00000553855 LMO7DNF2Z398 122 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 K7ESM1 405 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 INPP4BO15327 924 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 CBFA2T3O75081 653 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 GCATO75600 419 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 SPAM1P38567 509 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 PI4KAP42356 2102 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 GNPDA1P46926 289 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 DCDC1P59894 354 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 E2F1Q01094 437 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 C1orf61Q13536 156 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 SNX1Q13596 522 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 LAMB3Q13751 1172 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 GTF2H3Q13889 308 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 NR0B2Q15466 257 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 CCNG2Q16589 344 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 ALG11Q2TAA5 492 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 DEFB133Q30KQ1 61 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 SIRPB2Q5JXA9 342 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms