RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
TMEM258-203ENST00000535297 TCRBV7S2A1N4TA0A589 114 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 D6RAR5 112 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 USP12O75317 370 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 RPLP0P05388 317 aaKnown RBP13.66□□□□□ -0.22
TMEM258-203ENST00000535297 PDX1P52945 283 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 MAZP56270 477 aaKnown RBP13.66□□□□□ -0.22
TMEM258-203ENST00000535297 P3H1Q32P28 736 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 ZNF438Q7Z4V0 828 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 SPRED1Q7Z699 444 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
TMEM258-203ENST00000535297 NAGSQ8N159 534 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 FAM71DQ8N9W8 422 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 GFM1Q96RP9 751 aaKnown RBP13.66□□□□□ -0.22
TMEM258-203ENST00000535297 TBL1YQ9BQ87 522 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 OR2AG1Q9H205 316 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 LRRN3Q9H3W5 708 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 LRIT1Q9P2V4 623 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 ATXN10Q9UBB4 475 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
TMEM258-203ENST00000535297 PKP3Q9Y446 797 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 PLEKHM1Q9Y4G2 1056 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 PCYT1BQ9Y5K3 369 aaPredicted RBP13.66□□□□□ -0.22
TMEM258-203ENST00000535297 ENTPD2Q9Y5L3 495 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 FREM2Q5SZK8 3169 aa13.66□□□□□ -0.22
TMEM258-203ENST00000535297 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 A0A1W2PQM1 296 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 CHUKO15111 745 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ZW10O43264 779 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 GRID2O43424 1007 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 VEGFDO43915 354 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ECEL1O95672 775 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ZNF8P17098 575 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-203ENST00000535297 CCL7P80098 99 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 NR1D2Q14995 579 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 TAF1AQ15573 450 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-203ENST00000535297 PARP6Q2NL67 630 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ATP13A5Q4VNC0 1218 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 CHST15Q7LFX5 561 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ADGRG6Q86SQ4 1221 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ARL14Q8N4G2 192 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 TMEM121Q9BTD3 319 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 POLR1BQ9H9Y6 1135 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ARNT2Q9HBZ2 717 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 ARFGAP3Q9NP61 516 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 PPP2R2CQ9Y2T4 447 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 UNC13CQ8NB66 2214 aa13.65□□□□□ -0.22
TMEM258-203ENST00000535297 GLYATL1P3A0A0U1RQE8 302 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 GOLGA6L3A6NEY3 463 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 C2orf81A6NN90 581 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 RHPN2P1A8MT19 583 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 TMX2-CTNND1H3BSU7 103 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 CASC3O15234 703 aaKnown RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 STX7O15400 261 aaKnown RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LIASO43766 372 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 BRINP1O60477 761 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 DXOO77932 396 aaKnown RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 ACP5P13686 325 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 SLC2A4P14672 509 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LPOP22079 712 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 GPR3P46089 330 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LSSP48449 732 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 CLCNKAP51800 687 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 GDF10P55107 478 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 GABREP78334 506 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 PDE1BQ01064 536 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 BIRC2Q13490 618 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 OLIG2Q13516 323 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 ITGA9Q13797 1035 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 OASLQ15646 514 aaKnown RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 CLPPQ16740 277 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 KCTD11Q693B1 232 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 IGF2-ASQ6U949 168 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 FAM151BQ6UXP7 276 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LRRTM4Q86VH4 590 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LSMEM2Q8N112 164 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 Q8N9G6 341 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 BRSK1Q8TDC3 778 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 PATE1Q8WXA2 126 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 ATG4AQ8WYN0 398 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 ATXN7L3BQ96GX2 97 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LIN37Q96GY3 246 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 TMEM74Q96NL1 305 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 C19orf43Q9BQ61 176 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 APOL2Q9BQE5 337 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 ZCCHC2Q9C0B9 1178 aaKnown RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 SMOXQ9NWM0 555 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 TMPRSS11EQ9UL52 423 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 KCNK6Q9Y257 313 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 RAXQ9Y2V3 346 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 PRKAB1Q9Y478 270 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
TMEM258-203ENST00000535297 URB1O60287 2271 aaKnown RBP13.64□□□□□ -0.23
TMEM258-203ENST00000535297 CCDC187A0A096LP49 1063 aa13.63□□□□□ -0.23
TMEM258-203ENST00000535297 GAPDHSO14556 408 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms