RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 OLIG2Q13516 323 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 GTF2H3Q13889 308 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 SPARCL1Q14515 664 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 ATP13A5Q4VNC0 1218 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 LDLRAP1Q5SW96 308 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 CERCAMQ5T4B2 595 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 DENND5AQ6IQ26 1287 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 FAM151BQ6UXP7 276 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 NRROSQ86YC3 692 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 PDCD7Q8N8D1 485 aaKnown RBP15.67■□□□□ 0.1
TSKU-204ENST00000533752 DCBLD1Q8N8Z6 715 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 ZDHHC1Q8WTX9 485 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
TSKU-204ENST00000533752 CCDC3Q9BQI4 270 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 TMEM121BQ9BXQ6 578 aaPredicted RBP15.67■□□□□ 0.1
TSKU-204ENST00000533752 OR2AG1Q9H205 316 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 ATXN10Q9UBB4 475 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 APPL1Q9UKG1 709 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 DRG1Q9Y295 367 aaKnown RBP15.67■□□□□ 0.1
TSKU-204ENST00000533752 PTPRBP23467 1997 aa15.67■□□□□ 0.1
TSKU-204ENST00000533752 SPEGQ15772 3267 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 FAM149AA5PLN7 773 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 ZW10O43264 779 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 GRID2O43424 1007 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 NUDT21O43809 227 aaKnown RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 PRAMEF1O95521 474 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 MT-CO3P00414 261 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 PROS1P07225 676 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 SLC2A4P14672 509 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 ZNF8P17098 575 aaPredicted RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 AK4P27144 223 aaPredicted RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 LMAN1P49257 510 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 ZNF140P52738 457 aaPredicted RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 BIRC2Q13490 618 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 HLTFQ14527 1009 aaKnown RBP eCLIP15.66■□□□□ 0.1
TSKU-204ENST00000533752 PERM1Q5SV97 790 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 CDCP2Q5VXM1 449 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 GSTA5Q7RTV2 222 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 ADGRG6Q86SQ4 1221 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 RASGEF1CQ8N431 466 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 DDHD1Q8NEL9 900 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 OR4K2Q8NGD2 314 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 GDAP1Q8TB36 358 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 CCDC74AQ96AQ1 378 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 GRAMD1AQ96CP6 724 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 NXPE2Q96DL1 559 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 TTC25Q96NG3 672 aa15.66■□□□□ 0.1
TSKU-204ENST00000533752 SPATS2LQ9NUQ6 558 aaKnown RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 TRMT1Q9NXH9 659 aaKnown RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 TTC7AQ9ULT0 858 aaPredicted RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 MAP1BP46821 2468 aaKnown RBP15.66■□□□□ 0.1
TSKU-204ENST00000533752 C1QTNF9BB2RNN3 333 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 CHUKO15111 745 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 SUN1O94901 812 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 C1QTNF9P0C862 333 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 CDH17Q12864 832 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 TARDBPQ13148 414 aaKnown RBP eCLIP15.65■□□□□ 0.1
TSKU-204ENST00000533752 MSLNQ13421 630 aaPredicted RBP15.65■□□□□ 0.1
TSKU-204ENST00000533752 SEMA5AQ13591 1074 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 LAMB3Q13751 1172 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 GSE1Q14687 1217 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 CHRNA6Q15825 494 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 RBM44Q6ZP01 1051 aaKnown RBP15.65■□□□□ 0.1
TSKU-204ENST00000533752 CHST15Q7LFX5 561 aaPredicted RBP15.65■□□□□ 0.1
TSKU-204ENST00000533752 LRRTM4Q86VH4 590 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 C17orf82Q86X59 251 aaPredicted RBP15.65■□□□□ 0.1
TSKU-204ENST00000533752 SLC35F6Q8N357 371 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 AVL9Q8NBF6 648 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 ETNK1Q9HBU6 452 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 RAB6BQ9NRW1 208 aa15.65■□□□□ 0.1
TSKU-204ENST00000533752 AKAP13Q12802 2813 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 PGRMC1O00264 195 aaKnown RBP15.64■□□□□ 0.09
TSKU-204ENST00000533752 CES2O00748 559 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 KMOO15229 486 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 BUD23O43709 281 aaKnown RBP15.64■□□□□ 0.09
TSKU-204ENST00000533752 CDK14O94921 469 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 ACP5P13686 325 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 VCLP18206 1134 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 ITGALP20701 1170 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 CLCNKAP51800 687 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 NFATC2Q13469 925 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 SEPT6Q14141 434 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 SPIDRQ14159 915 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 PPP1R21Q6ZMI0 780 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 DNAAF3Q8N9W5 541 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 KDF1Q8NAX2 398 aaPredicted RBP15.64■□□□□ 0.09
TSKU-204ENST00000533752 ULK4Q96C45 1275 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 ZNF514Q96K75 400 aaPredicted RBP15.64■□□□□ 0.09
TSKU-204ENST00000533752 TIMM29Q9BSF4 260 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 STN1Q9H668 368 aaKnown RBP15.64■□□□□ 0.09
TSKU-204ENST00000533752 ARFGAP3Q9NP61 516 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
TSKU-204ENST00000533752 LRIT1Q9P2V4 623 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 ST14Q9Y5Y6 855 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 ASXL3Q9C0F0 2248 aa15.64■□□□□ 0.09
TSKU-204ENST00000533752 GOLGA6L10A0A0M3HER8 536 aa15.63■□□□□ 0.09
TSKU-204ENST00000533752 RHPN2P1A8MT19 583 aa15.63■□□□□ 0.09
TSKU-204ENST00000533752 AP3B1O00203 1094 aa15.63■□□□□ 0.09
TSKU-204ENST00000533752 GAPDHSO14556 408 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms