RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	TNNT1	P13805	278 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF28	P17035	718 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMEM11	P17152	192 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	HLA-DPA1	P20036	260 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	CHM	P24386	653 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	GJB2	P29033	226 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	SERPINF1	P36955	418 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	TNFSF9	P41273	254 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	WAS	P42768	502 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	MAGEA8	P43361	318 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ATP5O	P48047	213 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	POLE2	P56282	527 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	KRTAP10-9	P60411	292 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ASIC1	P78348	528 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZXDB	P98169	803 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	LRMP	Q12912	555 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ELAVL2	Q12926	359 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PKP1	Q13835	747 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PTK2B	Q14289	1009 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	GEN1	Q17RS7	908 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	MCMDC2	Q4G0Z9	681 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	FAM26F	Q5R3K3	315 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	SFMBT2	Q5VUG0	894 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	SNX30	Q5VWJ9	437 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	IYD	Q6PHW0	289 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	GBP6	Q6ZN66	633 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	USP45	Q70EL2	814 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PIWIL3	Q7Z3Z3	882 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRPF39	Q86UA1	669 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	STK32C	Q86UX6	486 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	VASH2	Q86V25	355 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	CDR2L	Q86X02	465 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	RNF152	Q8N8N0	203 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	CNNM3	Q8NE01	707 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636		Q8NFD4	153 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ENGASE	Q8NFI3	743 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	CTCFL	Q8NI51	663 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	SUN5	Q8TC36	379 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZFAND2B	Q8WV99	257 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	HSPH1	Q92598	858 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PSMG2	Q969U7	264 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	DACT3	Q96B18	629 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	RAX2	Q96IS3	184 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PDLIM2	Q96JY6	352 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	MRGPRX1	Q96LB2	322 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ACOX2	Q99424	681 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZPBP	Q9BS86	351 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	NACAP1	Q9BZK3	213 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PAIP1	Q9H074	479 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZCWPW1	Q9H0M4	648 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	TNMD	Q9H2S6	317 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	GOLGA2P5	Q9HBQ8	144 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	TM9SF3	Q9HD45	589 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	DDX18	Q9NVP1	670 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ADPRHL2	Q9NX46	363 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	PSD3	Q9NYI0	1048 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	COQ3	Q9NZJ6	369 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	NTM	Q9P121	344 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	SUCLA2	Q9P2R7	463 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	CROT	Q9UKG9	612 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	ENTPD4	Q9Y227	616 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	JRKL	Q9Y4A0	524 aa		5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636	RBM8A	Q9Y5S9	174 aa	Known RBP	5.21	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A0A6YYJ9	748 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRSS38	A1L453	326 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	RGSL1	A5PLK6	1076 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	LRRC72	A6NJI9	287 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	BTBD18	B2RXH4	712 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636		K7EPI3	171 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	AP3D1	O14617	1153 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CEP104	O60308	925 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	SMPD2	O60906	423 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF217	O75362	1048 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	SEC22B	O75396	215 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	HEXB	P07686	556 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	QDPR	P09417	244 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	OR4Q2	P0C623	313 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	NR2F1	P10589	423 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTHFD2	P13995	350 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CKMT2	P17540	419 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	NR1D1	P20393	614 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CD6	P30203	668 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	NMT1	P30419	496 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TLX1	P31314	330 aa	Predicted RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ACSL1	P33121	698 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	MATR3	P43243	847 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	IFNAR2	P48551	515 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CENPA	P49450	140 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	GPR15	P49685	360 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CLCNKB	P51801	687 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	PPP5C	P53041	499 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	LINC00310	P59036	64 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRKCE	Q02156	737 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	MRPL49	Q13405	166 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTF1	Q14872	753 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.2	□□□□□ -1.58	3e-13	■■■■□ 20.6
PABPC1-223	ENST00000523636	ADIPOQ	Q15848	244 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	UPP1	Q16831	310 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	UGT8	Q16880	541 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms