RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 DDX41Q9UJV9 622 aaKnown RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 CNTN6Q9UQ52 1028 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 KLHDC2Q9Y2U9 406 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 R3HCC1Q9Y3T6 440 aaKnown RBP-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ANGPTL3Q9Y5C1 460 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 WSB1Q9Y6I7 421 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 ROS1P08922 2347 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 NSD2O96028 1365 aa-1.25□□□□□ -2.61
SNORA40.16-201ENST00000517238 UBR5O95071 2799 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 DDTLA6NHG4 134 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 RNMTO43148 476 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 KHDRBS3O75525 346 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SEC14L2O76054 403 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 LARGE1O95461 756 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 EEF2P13639 858 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 CSF2RAP15509 400 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MAGP20916 626 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC11A2P49281 568 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 AMPHP49418 695 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 CLCNKBP51801 687 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 ITGA8P53708 1063 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SHC2P98077 582 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SRSF2Q01130 221 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 STK3Q13188 491 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 IL10RAQ13651 578 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SART3Q15020 963 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MPPED2Q15777 294 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MTHFSDQ2M296 383 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MYLK3Q32MK0 819 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 KIF6Q6ZMV9 814 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 PLPPR4Q7Z2D5 763 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MDGA2Q7Z553 956 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 C5orf24Q7Z6I8 188 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 NOXA1Q86UR1 476 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 PHC2Q8IXK0 858 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF654Q8IZM8 581 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 ADSSL1Q8N142 457 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZCCHC24Q8N2G6 241 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 ADPRHL1Q8NDY3 354 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MAGEC3Q8TD91 643 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC5A5Q92911 643 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 RANBP9Q96S59 729 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 SERINC2Q96SA4 455 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 KXD1Q9BQD3 176 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 OSBPL11Q9BXB4 747 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 NPLQ9BXD5 320 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 MRPL4Q9BYD3 311 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 FRMD8Q9BZ67 464 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 OSBPL5Q9H0X9 879 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 GLT8D2Q9H1C3 349 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 UBQLN3Q9H347 655 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 JPT2Q9H910 190 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 WDR6Q9NNW5 1121 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 TAB2Q9NYJ8 693 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 PFDN2Q9UHV9 154 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 HACL1Q9UJ83 578 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 PALLDQ8WX93 1383 aa-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 TPRP12270 2363 aaKnown RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 COL1A1P02452 1464 aaPredicted RBP-1.26□□□□□ -2.61
SNORA40.16-201ENST00000517238 HERC1Q15751 4861 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 A8MX80 341 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 TFECO14948 347 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 HCRTO43612 131 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 TSPAN3O60637 253 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 RPLP2P05387 115 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 SSBP05455 408 aaKnown RBP eCLIP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 ALDOCP09972 364 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM153BP0C7A2 387 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CRISP2P16562 243 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 POLR2CP19387 275 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CYP2A7P20853 494 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CSRP1P21291 193 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CORO1AP31146 461 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 AHRP35869 848 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 PIGAP37287 484 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CLCNKAP51800 687 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 COPAP53621 1224 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 PAX9P55771 341 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 SEC61BP60468 96 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 TAGLNQ01995 201 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 MBTD1Q05BQ5 628 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 PPIDQ08752 370 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 MTAPQ13126 283 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CTF1Q16619 201 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 KRTAP20-2Q3LI61 65 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 PCOTHQ58A44 107 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM182AQ5T1J6 154 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CYP4A22Q5TCH4 519 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 AGAP7PQ5VUJ5 663 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 NCAPH2Q6IBW4 605 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 NFRKBQ6P4R8 1299 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CTR9Q6PD62 1173 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 GDPGP1Q6ZNW5 385 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 BRINP3Q76B58 766 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CPEB2Q7Z5Q1 589 aaKnown RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 KCTD20Q7Z5Y7 419 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 PPP1R3BQ86XI6 285 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 LACC1Q8IV20 430 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF34Q8IZ26 560 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 ADGRF3Q8IZF5 1079 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms