RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SMURF2Q9HAU4 748 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 KCNMB3Q9NPA1 279 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 B3GAT2Q9NPZ5 323 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SAMD4AQ9UPU9 718 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 GNEQ9Y223 722 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 HEBP2Q9Y5Z4 205 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 GLYATL1P3A0A0U1RQE8 302 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 RGSL1A5PLK6 1076 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 GSC2O15499 205 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 AKAP8O43823 692 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 TSPAN9O75954 239 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 LCA5LO95447 670 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ALOX5P09917 674 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ERCC2P18074 760 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 GRK6P43250 576 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ABCG1P45844 678 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 DGKGP49619 791 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ATP6V0D1P61421 351 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TSPAN5P62079 268 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TAF10Q12962 218 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 LRRC32Q14392 662 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 HKDC1Q2TB90 917 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 C4orf46Q504U0 113 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 C2orf27AQ580R0 203 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CPTPQ5TA50 214 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 WDR59Q6PJI9 974 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 IZUMO2Q6UXV1 221 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ARHGAP36Q6ZRI8 547 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SNX33Q8WV41 574 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CASKIN2Q8WXE0 1202 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 AP3S1Q92572 193 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ELMO3Q96BJ8 720 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CDRT15Q96T59 188 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CDH19Q9H159 772 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 EPB41L1Q9H4G0 881 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 OSGEPQ9NPF4 335 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 DDX4Q9NQI0 724 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 GRIP1Q9Y3R0 1128 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SAMHD1Q9Y3Z3 626 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 MTF2Q9Y483 593 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 OAS3Q9Y6K5 1087 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 IRS2Q9Y4H2 1338 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 A0A0A0MRY4 1105 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 IRGMA1A4Y4 181 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 PSMD9O00233 223 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SUV39H1O43463 412 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 DCXO43602 365 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 RB1P06400 928 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 OGNP20774 298 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 ITPKAP23677 461 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 RGS8P57771 180 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 ATP1A4Q13733 1029 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 RRP1BQ14684 758 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 OTOP3Q7RTS5 596 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 OR6Y1Q8NGX8 325 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 UPF1Q92900 1129 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP38-203ENST00000511739 APOPT1Q96IL0 206 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 MFSD14AQ96MC6 490 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SPATA13Q96N96 652 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 FCRL4Q96PJ5 515 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 PORCNQ9H237 461 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 FKBP14Q9NWM8 211 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 KCTD5Q9NXV2 234 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 EVLQ9UI08 416 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 MAFFQ9ULX9 164 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SSR3Q9UNL2 185 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CLCA3PQ9Y6N3 262 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TMEM150BA6NC51 233 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 B4DGG1 531 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 APOC4-APOC2K7ER74 178 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 OR1F1O43749 312 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 APOC2P02655 101 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ANPEPP15144 967 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ADRA1DP25100 572 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CAPGP40121 348 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 MLLT3P42568 568 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 VLDLRP98155 873 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 RAB39AQ14964 217 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 NUP188Q5SRE5 1749 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 UBXN11Q5T124 520 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ZFP1Q6P2D0 407 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TMPRSS11AQ6ZMR5 421 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 PTCHD4Q6ZW05 846 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SAPCD2Q86UD0 394 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CHERPQ8IWX8 916 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 TCAIMQ8N3R3 496 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TRIM39Q9HCM9 518 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ETNK2Q9NVF9 386 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CLEC4AQ9UMR7 237 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 BTRCQ9Y297 605 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 MYRFQ9Y2G1 1151 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 A0A075B6Q4 140 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 FAM234BA2RU67 622 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 RIIAD1A6NNX1 92 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 A8MUI8 341 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 SLC33A1O00400 549 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 B3GALT2O43825 422 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 IL33O95760 270 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ACRP10323 421 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 SSTR1P30872 391 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms