RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SLC46A1Q96NT5 459 aa18.48■□□□□ 0.55
UBE3D-207ENST00000509102 PLEKHG4BQ96PX9 1271 aa18.48■□□□□ 0.55
UBE3D-207ENST00000509102 FOXP3Q9BZS1 431 aa18.48■□□□□ 0.55
UBE3D-207ENST00000509102 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.48■□□□□ 0.55
UBE3D-207ENST00000509102 CNOT6Q9ULM6 557 aaKnown RBP18.48■□□□□ 0.55
UBE3D-207ENST00000509102 SSUH2Q9Y2M2 353 aa18.48■□□□□ 0.55
UBE3D-207ENST00000509102 OAS3Q9Y6K5 1087 aaKnown RBP18.48■□□□□ 0.55
UBE3D-207ENST00000509102 LOC285095A0A1B0GVY8 99 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 GRID2IPA4D2P6 1211 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 F5H423 210 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-207ENST00000509102 GRID2O43424 1007 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 NUAK1O60285 661 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 DNAJC6O75061 913 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 TNFSF15O95150 251 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 CPNE6O95741 557 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 JMJD7P0C870 316 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 RBP3P10745 1247 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 HMGCLP35914 325 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 PDX1P52945 283 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 GSDMDP57764 484 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 SIRPB2Q5JXA9 342 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 KDELC1Q6UW63 502 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 GLT6D1Q7Z4J2 308 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 ZNF438Q7Z4V0 828 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 PDZD3Q86UT5 571 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 SFTPA2Q8IWL1 248 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 NAGSQ8N159 534 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 LRRC57Q8N9N7 239 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 AVL9Q8NBF6 648 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 TTC13Q8NBP0 860 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 KCNE4Q8WWG9 221 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 GLYATL1Q969I3 302 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 CMKLR1Q99788 373 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 GBA3Q9H227 469 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 TRIM39Q9HCM9 518 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 AAR2Q9Y312 384 aaKnown RBP18.47■□□□□ 0.55
UBE3D-207ENST00000509102 PKP3Q9Y446 797 aa18.47■□□□□ 0.55
UBE3D-207ENST00000509102 PPFIA2O75334 1257 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ITGA2BP08514 1039 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ACP5P13686 325 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 BPIP17213 487 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 GTF2H3Q13889 308 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 NR1D2Q14995 579 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 SLC1A5Q15758 541 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 PHF19Q5T6S3 580 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 B3GNT8Q7Z7M8 397 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 TMEM139Q8IV31 216 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 GDAP1Q8TB36 358 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 BLOC1S5Q8TDH9 187 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 SH3KBP1Q96B97 665 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 EID2BQ96D98 161 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 AHCYL2Q96HN2 611 aaKnown RBP18.46■□□□□ 0.55
UBE3D-207ENST00000509102 MRGPRX2Q96LB1 330 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 TTC25Q96NG3 672 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 DPYSL5Q9BPU6 564 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 HERPUD2Q9BSE4 406 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 DESI2Q9BSY9 194 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 TSGA10Q9BZW7 698 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 OR2AG1Q9H205 316 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ASCL3Q9NQ33 180 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 KCNK4Q9NYG8 393 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ATXN10Q9UBB4 475 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ATXN7L1Q9ULK2 861 aaPredicted RBP18.46■□□□□ 0.55
UBE3D-207ENST00000509102 PRKAB1Q9Y478 270 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 PLEKHM1Q9Y4G2 1056 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 SPO11Q9Y5K1 396 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ADAMTS20P59510 1910 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 ITPR1Q14643 2758 aa18.46■□□□□ 0.55
UBE3D-207ENST00000509102 OR5K4A6NMS3 321 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 KCNN4O15554 427 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 VEGFDO43915 354 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 PYGMP11217 842 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 FASLGP48023 281 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 UCNP55089 124 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 OR1D5P58170 312 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 B4GALNT1Q00973 533 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 INSCQ1MX18 579 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 PATE1Q8WXA2 126 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 ALG3Q92685 438 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 OXNAD1Q96HP4 312 aaPredicted RBP18.45■□□□□ 0.54
UBE3D-207ENST00000509102 NAF1Q96HR8 494 aaKnown RBP18.45■□□□□ 0.54
UBE3D-207ENST00000509102 VPS35Q96QK1 796 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 SLC38A3Q99624 504 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 DPH1Q9BZG8 443 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 ZCCHC2Q9C0B9 1178 aaKnown RBP18.45■□□□□ 0.54
UBE3D-207ENST00000509102 BPIFA1Q9NP55 256 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.45■□□□□ 0.54
UBE3D-207ENST00000509102 KCNK6Q9Y257 313 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 ST14Q9Y5Y6 855 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 ARHGEF17Q96PE2 2063 aaPredicted RBP18.45■□□□□ 0.54
UBE3D-207ENST00000509102 ZFHX4Q86UP3 3567 aa18.45■□□□□ 0.54
UBE3D-207ENST00000509102 KMOO15229 486 aa18.44■□□□□ 0.54
UBE3D-207ENST00000509102 CASC3O15234 703 aaKnown RBP18.44■□□□□ 0.54
UBE3D-207ENST00000509102 SNX2O60749 519 aa18.44■□□□□ 0.54
UBE3D-207ENST00000509102 ZNF8P17098 575 aaPredicted RBP18.44■□□□□ 0.54
UBE3D-207ENST00000509102 VCLP18206 1134 aa18.44■□□□□ 0.54
UBE3D-207ENST00000509102 ITPKBP27987 946 aa18.44■□□□□ 0.54
UBE3D-207ENST00000509102 UGT1A5P35504 534 aa18.44■□□□□ 0.54
UBE3D-207ENST00000509102 SPAM1P38567 509 aa18.44■□□□□ 0.54
UBE3D-207ENST00000509102 GPLD1P80108 840 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms