RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SPAG6O75602 509 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 ATP1A1P05023 1023 aaKnown RBP20■□□□□ 0.79
PDLIM1-202ENST00000477757 ZNF30P17039 623 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 SEPHS1P49903 392 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 POLR2FP61218 127 aaKnown RBP20■□□□□ 0.79
PDLIM1-202ENST00000477757 DPYSQ14117 519 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 DCUN1D2Q6PH85 259 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 PRSS42Q7Z5A4 293 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 TCTN2Q96GX1 697 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 ELMO2Q96JJ3 720 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 PEBP4Q96S96 227 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 RMI1Q9H9A7 625 aa20■□□□□ 0.79
PDLIM1-202ENST00000477757 ERRFI1Q9UJM3 462 aaPredicted RBP20■□□□□ 0.79
PDLIM1-202ENST00000477757 EPHB6O15197 1021 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 LRCH4O75427 683 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 UBXN7O94888 489 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 LEPRP48357 1165 aaKnown RBP19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 STC1P52823 247 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 MAXP61244 160 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 PTSQ03393 145 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 CHAF1BQ13112 559 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 PPP6R3Q5H9R7 873 aaPredicted RBP19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 ERMARDQ5T6L9 678 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 PPP1R3BQ86XI6 285 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 PHYKPLQ8IUZ5 450 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 BBS5Q8N3I7 341 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 Q8NA96 180 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 SMIM14Q96QK8 99 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 NLRC4Q9NPP4 1024 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 FAM207AQ9NSI2 230 aaPredicted RBP19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 CNOT6Q9ULM6 557 aaKnown RBP19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 C2CD3Q4AC94 2353 aa19.99■□□□□ 0.79
PDLIM1-202ENST00000477757 FZD6O60353 706 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 RASSF9O75901 435 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 PDHA1P08559 390 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 TYRP1P17643 537 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 VARSP26640 1264 aaKnown RBP19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 HCAR3P49019 387 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 KLK7P49862 253 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 ZNF135P52742 658 aaPredicted RBP19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 CHRNA6Q15825 494 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 CAMK4Q16566 473 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 JMJD6Q6NYC1 403 aaPredicted RBP19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 CYB5D1Q6P9G0 228 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 TMEM26Q6ZUK4 368 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 CYP4V2Q6ZWL3 525 aaPredicted RBP19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 NDUFAF2Q8N183 169 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 PRR7Q8TB68 274 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 PLEKHG4BQ96PX9 1271 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 RUFY1Q96T51 708 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 GPR87Q9BY21 358 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 ACSS2Q9NR19 701 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 SEPT11Q9NVA2 429 aaKnown RBP19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 ZNF451Q9Y4E5 1061 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 PCDHGB7Q9Y5F8 929 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 SLC30A1Q9Y6M5 507 aa19.98■□□□□ 0.79
PDLIM1-202ENST00000477757 A0A0J9YYE9 177 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 TIAF1O95411 115 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 TRBC1P01850 177 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 ELAVL4P26378 380 aaKnown RBP19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 EEF1GP26641 437 aaKnown RBP19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 CAPZBP47756 277 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 CLCNKAP51800 687 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 RIPPLY3P57055 190 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 IL10RAQ13651 578 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 LAMB3Q13751 1172 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 TCP11X2Q5H9J9 407 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 C1QL3Q5VWW1 255 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 SYVN1Q86TM6 617 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 PSTKQ8IV42 348 aaKnown RBP19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 RAVER1Q8IY67 606 aaKnown RBP19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 ARFGAP1Q8N6T3 406 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 KLHL6Q8WZ60 621 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 ING2Q9H160 280 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 CWC15Q9P013 229 aaKnown RBP19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 PCSK1NQ9UHG2 260 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 DNPEPQ9ULA0 475 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 SRPK3Q9UPE1 567 aa19.97■□□□□ 0.79
PDLIM1-202ENST00000477757 APCP25054 2843 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 ARGFXA6NJG6 315 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 KIF1CO43896 1103 aaKnown RBP19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 MAFKO60675 156 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 CEACAM4O75871 244 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 XRCC1P18887 633 aaPredicted RBP19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 PSMA2P25787 234 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 PTPN4P29074 926 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 MMP13P45452 471 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 RPS18P62269 152 aaKnown RBP19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 SYCP1Q15431 976 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 AOPEPQ8N6M6 819 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 SLAMF7Q9NQ25 335 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 TAB2Q9NYJ8 693 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 SCHIP1Q9P0W5 487 aaPredicted RBP19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 LUZP4Q9P127 313 aa19.96■□□□□ 0.79
PDLIM1-202ENST00000477757 NUAK1O60285 661 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 DPM1O60762 260 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 AMD1P17707 334 aa19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 NELFEP18615 380 aaKnown RBP19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 POU3F2P20265 443 aaPredicted RBP19.95■□□□□ 0.78
PDLIM1-202ENST00000477757 CCL11P51671 97 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms