RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 KIR2DS3K7RE56 304 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 EFSO43281 561 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 NUAK1O60285 661 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 ITGB2P05107 769 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 CCL4P13236 92 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 CSF2RBP32927 897 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 NR2C2P49116 596 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 RAB15P59190 212 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 KIR2DS5Q14953 304 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.6□□□□□ -0.07
CBX3-203ENST00000409747 CCDC70Q6NSX1 233 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 TRIB3Q96RU7 358 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 CHP1Q99653 195 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 DDA1Q9BW61 102 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.6□□□□□ -0.07
CBX3-203ENST00000409747 ASPSCR1Q9BZE9 553 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 EPB41L1Q9H4G0 881 aa14.6□□□□□ -0.07
CBX3-203ENST00000409747 OR5K4A6NMS3 321 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 GRID2O43424 1007 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 SPOPO43791 374 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 FGF3P11487 239 aaPredicted RBP14.59□□□□□ -0.07
CBX3-203ENST00000409747 ACP5P13686 325 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 EPHA4P54764 986 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 CDK18Q07002 472 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 TCEAL1Q15170 157 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 WDR74Q6RFH5 385 aaPredicted RBP14.59□□□□□ -0.07
CBX3-203ENST00000409747 TRAM1L1Q8N609 369 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 CEP41Q9BYV8 373 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 GPR63Q9BZJ6 419 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 TBC1D29Q9UFV1 150 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 KCNK6Q9Y257 313 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 ZNF711Q9Y462 761 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 PRKAB1Q9Y478 270 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 AHCTF1Q8WYP5 2266 aa14.59□□□□□ -0.07
CBX3-203ENST00000409747 A0A0A6YYK5 440 aaPredicted RBP14.58□□□□□ -0.07
CBX3-203ENST00000409747 B4E171 279 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 SLC25A14O95258 325 aaPredicted RBP14.58□□□□□ -0.07
CBX3-203ENST00000409747 F3P13726 295 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 TSPAN7P41732 249 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 TNNT3P45378 269 aaPredicted RBP14.58□□□□□ -0.07
CBX3-203ENST00000409747 CLCNKAP51800 687 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 DYNLT1P63172 113 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 TFDP2Q14188 446 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 PCSK7Q16549 785 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 IYDQ6PHW0 289 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 FAM129CQ86XR2 697 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 RNF25Q96BH1 459 aaPredicted RBP14.58□□□□□ -0.07
CBX3-203ENST00000409747 TADA1Q96BN2 335 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 TEFMQ96QE5 360 aaKnown RBP14.58□□□□□ -0.07
CBX3-203ENST00000409747 ARHGAP9Q9BRR9 750 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 TRIM39Q9HCM9 518 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 PDP2Q9P2J9 529 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 PCDHGA4Q9Y5G9 962 aa14.58□□□□□ -0.07
CBX3-203ENST00000409747 ZNF462Q96JM2 2506 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 TRBV23OR9-2A0A075B6M9 112 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 AKR1B15C9JRZ8 316 aaPredicted RBP14.58□□□□□ -0.08
CBX3-203ENST00000409747 MTSS1O43312 755 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 PSTPIP1O43586 416 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 NDST3O95803 873 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 EML2O95834 649 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 SLC4A1P02730 911 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 NFATC2Q13469 925 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 TEX44Q53QW1 395 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 DCAF12Q5T6F0 453 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 ALS2CLQ60I27 953 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 NPNTQ6UXI9 565 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 KDELC2Q7Z4H8 507 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 TMC3Q7Z5M5 1100 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 VASH2Q86V25 355 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 ZNF761Q86XN6 746 aaPredicted RBP14.58□□□□□ -0.08
CBX3-203ENST00000409747 TFB1MQ8WVM0 346 aaKnown RBP14.58□□□□□ -0.08
CBX3-203ENST00000409747 ART4Q93070 314 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 GLYATL1Q969I3 302 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 SEMA4CQ9C0C4 833 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 OR2AG1Q9H205 316 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 GLOD4Q9HC38 313 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 SLC39A1Q9NY26 324 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 ATXN10Q9UBB4 475 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 SHOC2Q9UQ13 582 aa14.58□□□□□ -0.08
CBX3-203ENST00000409747 PCYT1BQ9Y5K3 369 aaPredicted RBP14.58□□□□□ -0.08
CBX3-203ENST00000409747 COL6A6A6NMZ7 2263 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 A6NCN8 305 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 B8ZZF3 427 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 SNX2O60749 519 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 TNNT1P13805 278 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 ZNF8P17098 575 aaPredicted RBP14.57□□□□□ -0.08
CBX3-203ENST00000409747 COMTP21964 271 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 MPSTP25325 297 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 PRKD1Q15139 912 aaPredicted RBP14.57□□□□□ -0.08
CBX3-203ENST00000409747 GPR26Q8NDV2 337 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 EID2BQ96D98 161 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 PLEKHG4BQ96PX9 1271 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 OSGEPL1Q9H4B0 414 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 TMEM9Q9P0T7 183 aa14.57□□□□□ -0.08
CBX3-203ENST00000409747 LILRA5A6NI73 299 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 EFCAB7A8K855 629 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 VEGFDO43915 354 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 MT-CYBP00156 380 aaPredicted RBP14.56□□□□□ -0.08
CBX3-203ENST00000409747 PIRTP0C851 137 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms