RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 MMP2P08253 660 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 NAGAP17050 411 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 HOXA11P31270 313 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 HADHAP40939 763 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 CASP2P42575 452 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 RFX2P48378 723 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 DRG2P55039 364 aaKnown RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 IRX6P78412 446 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 ABATP80404 500 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 ADORA2A-AS1P86434 159 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 CSTF3Q12996 717 aaKnown RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 DRAP1Q14919 205 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 TWIST1Q15672 202 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZNF260Q3ZCT1 412 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 FSCBQ5H9T9 825 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 DNTTIP2Q5QJE6 756 aaKnown RBP5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 NCEH1Q6PIU2 408 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 KLHL24Q6TFL4 600 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 PELI3Q8N2H9 469 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 WDTC1Q8N5D0 677 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 CCDC191Q8NCU4 936 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 OIT3Q8WWZ8 545 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 TRIB2Q92519 343 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZNF570Q96NI8 536 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 MAP7D2Q96T17 732 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 SDF4Q9BRK5 362 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 EBF3Q9H4W6 596 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 NARFQ9UHQ1 456 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 CEPT1Q9Y6K0 416 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 NRXN2Q9P2S2 1712 aa5.06□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM237AA0A1B0GTK4 181 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 VWA5AO00534 786 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 AP3D1O14617 1153 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 SOX30O94993 753 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 CYC1P08574 325 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 HOXB5P09067 269 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 UBTFL1P0CB47 393 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 ARRB2P32121 409 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 PPARGP37231 505 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 GOLGA8DPQ0D2H9 430 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 NAE1Q13564 534 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 GCKRQ14397 625 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 PARP10Q53GL7 1025 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 DCAF6Q58WW2 860 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 RPAP2Q8IXW5 612 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZNF34Q8IZ26 560 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 TTC39CQ8N584 583 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 BEST2Q8NFU1 509 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 ADAMTS14Q8WXS8 1223 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 ARHGEF2Q92974 986 aaKnown RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZKSCAN4Q969J2 545 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 MEIS3Q99687 375 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 GHITMQ9H3K2 345 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 HCFC1R1Q9NWW0 138 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 CWC25Q9NXE8 425 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 EHD2Q9NZN4 543 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 DLGAP2Q9P1A6 1054 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 FBXO9Q9UK97 447 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 FZD10Q9ULW2 581 aa5.05□□□□□ -1.6
HMGB3P19-201ENST00000403971 CDHR2Q9BYE9 1310 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 USP42Q9H9J4 1324 aaKnown RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 TMEM202A6NGA9 273 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 CD8B2A6NJW9 211 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 BTBD18B2RXH4 712 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 MTA2O94776 668 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 PCCAP05165 728 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 G6PDP11413 515 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 TM4SF1P30408 202 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 RFC4P35249 363 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 EIF2S3P41091 472 aaKnown RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 CLCN3P51790 818 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 NUDT6P53370 316 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 ROR2Q01974 943 aaKnown RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 ST3GAL1Q11201 340 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 FOXD4Q12950 439 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 OLIG2Q13516 323 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 HLFQ16534 295 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 MEA1Q16626 185 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 ZNF549Q6P9A3 640 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 KLHL35Q6PF15 583 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 B3GNT6Q6ZMB0 384 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 MTSS1LQ765P7 747 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 LINGO2Q7L985 606 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 SHFQ7M4L6 423 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 GSTA5Q7RTV2 222 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 ARHGAP12Q8IWW6 846 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 PRR26Q8N8Z3 221 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 NEK9Q8TD19 979 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 OTULINQ96BN8 352 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 PPP1R13BQ96KQ4 1090 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 SLITRK1Q96PX8 696 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 TREX2Q9BQ50 279 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 ESRP2Q9H6T0 727 aaKnown RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 MKKSQ9NPJ1 570 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 GPR108Q9NPR9 543 aa5.04□□□□□ -1.6
HMGB3P19-201ENST00000403971 A0A1B0GVM2 712 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 A0A1W2PRG0 241 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 ANKRD18BA2A2Z9 1011 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM90A8PA6NJQ4 464 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 OR6C75A6NL08 312 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms