RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 ZDHHC9Q9Y397 364 aa6.86□□□□□ -1.31
CEACAM1-208ENST00000403461 COQ4Q9Y3A0 265 aa6.86□□□□□ -1.31
CEACAM1-208ENST00000403461 CSNK1G3Q9Y6M4 447 aa6.86□□□□□ -1.31
CEACAM1-208ENST00000403461 PRSS38A1L453 326 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 AQP9O43315 295 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 CLDN11O75508 207 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 TRUB2O95900 331 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ITGA2BP08514 1039 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 CHRNA3P32297 505 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 CSF2RBP32927 897 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 NUMBP49757 651 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 METAP1P53582 386 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SNX16P57768 344 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 YWHAZP63104 245 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 RPS21P63220 83 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KRT85P78386 507 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SGCGQ13326 291 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 EIF3IQ13347 325 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ZNF284Q2VY69 593 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 PIP5KL1Q5T9C9 394 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KIAA1614Q5VZ46 1190 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KIAA1161Q6NSJ0 714 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KYAT3Q6YP21 454 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KRBA2Q6ZNG9 492 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 Q6ZSR6 202 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ERN2Q76MJ5 926 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ABI3BPQ7Z7G0 1075 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 BCL6BQ8N143 479 aaPredicted RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ATP11CQ8NB49 1132 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SYT8Q8NBV8 401 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ZNF548Q8NEK5 533 aaPredicted RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 TMIEQ8NEW7 156 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 OR5AN1Q8NGI8 311 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 TFAP2BQ92481 460 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 MYEOVQ96EZ4 313 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 ATXN7L3BQ96GX2 97 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 FEM1CQ96JP0 617 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SLC46A1Q96NT5 459 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KCNC2Q96PR1 638 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 FEM1AQ9BSK4 669 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 KRTAP4-5Q9BYR2 181 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SEMA4CQ9C0C4 833 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 FZD3Q9NPG1 666 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 C14orf119Q9NWQ9 140 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 DDIT4Q9NX09 232 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SEPT10Q9P0V9 454 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SAE1Q9UBE0 346 aaPredicted RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SPASTQ9UBP0 616 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 XPO7Q9UIA9 1087 aaKnown RBP6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 RCOR1Q9UKL0 485 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 SARDHQ9UL12 918 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 HPSEQ9Y251 543 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 HS3ST3A1Q9Y663 406 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 MAST4O15021 2626 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 PLXNB3Q9ULL4 1909 aa6.85□□□□□ -1.31
CEACAM1-208ENST00000403461 GOLGA4Q13439 2230 aaKnown RBP6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 SYNJ2BP-COX16A0A087WUM0 186 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CCDC187A0A096LP49 1063 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 PYCARD-AS1I3L0S3 204 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 M0QYT0 321 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 FPGTO14772 594 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 TPP1O14773 563 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 MUSKO15146 869 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 NEBLO76041 1014 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 TNFSF15O95150 251 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 SMC2O95347 1197 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CSF2P04141 144 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 FYNP06241 537 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 RHOCP08134 193 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 KRT5P13647 590 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 NEK3P51956 506 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 NDUFA8P51970 172 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 THOP1P52888 689 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CDH4P55283 916 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 SCAND1P57086 179 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CLDN2P57739 230 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 GCNT1Q02742 428 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 LRRC63Q05C16 580 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 STIM1Q13586 685 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 SPIDRQ14159 915 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 PTK2BQ14289 1009 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 USP10Q14694 798 aaKnown RBP6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 MEA1Q16626 185 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CCDC40Q4G0X9 1142 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 ZNF542PQ5EBM4 170 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CXorf57Q6NSI4 855 aaKnown RBP6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 RETSATQ6NUM9 610 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 FBXL22Q6P050 247 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 BORAQ6PGQ7 559 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 LRRC31Q6UY01 552 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 GCNT7Q6ZNI0 430 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 SH2D3CQ8N5H7 860 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 LMX1AQ8TE12 382 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 KLK6Q92876 244 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 SLC35C1Q96A29 364 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 ARRDC3Q96B67 414 aa6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.84□□□□□ -1.31
CEACAM1-208ENST00000403461 C1QTNF7Q9BXJ2 289 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms