RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 C1orf54Q8WWF1 131 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 ANP32BQ92688 251 aaKnown RBP13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 LRRC45Q96CN5 670 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 LRRC40Q9H9A6 602 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 TRIM39Q9HCM9 518 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 BPIFA1Q9NP55 256 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 IL26Q9NPH9 171 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 ATXN10Q9UBB4 475 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 TTC7AQ9ULT0 858 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 PCYT1BQ9Y5K3 369 aaPredicted RBP13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 CELSR3Q9NYQ7 3312 aa13.23□□□□□ -0.29
HLA-DMA-202ENST00000395303 CPED1A4D0V7 1026 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 ERI2A8K979 691 aaKnown RBP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 NUAK1O60285 661 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 SLC25A14O95258 325 aaPredicted RBP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 ASMTLO95671 621 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 FGGP02679 453 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 SLC4A1P02730 911 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 ATP1A1P05023 1023 aaKnown RBP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 PNLIPP16233 465 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 LPOP22079 712 aaPredicted RBP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 PSMA3P25788 255 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 AK4P27144 223 aaPredicted RBP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 FDFT1P37268 417 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 SPAM1P38567 509 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 CLCNKAP51800 687 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 PDE1BQ01064 536 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 PEX6Q13608 980 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 LRP8Q14114 963 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 C14orf28Q4W4Y0 310 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 PERM1Q5SV97 790 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 ADGRG6Q86SQ4 1221 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 GALNT13Q8IUC8 556 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 WDR48Q8TAF3 677 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 APOL2Q9BQE5 337 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 SPATS2LQ9NUQ6 558 aaKnown RBP13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 SMOXQ9NWM0 555 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 TAAR2Q9P1P5 351 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 ZNF148Q9UQR1 794 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 PKP3Q9Y446 797 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
HLA-DMA-202ENST00000395303 AGAP14A8MT82 685 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 NTN3O00634 580 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 STX7O15400 261 aaKnown RBP13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 VEGFDO43915 354 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 CEP104O60308 925 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 USP12O75317 370 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 MT-CO3P00414 261 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 JUPP14923 745 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 GLB1P16278 677 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ZNF8P17098 575 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 SEMA5AQ13591 1074 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 SNX1Q13596 522 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ITGA9Q13797 1035 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 TCEA2Q15560 299 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ATP13A5Q4VNC0 1218 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 C19orf48Q6RUI8 117 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 C4orf22Q6V702 233 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ZNF438Q7Z4V0 828 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 PHYKPLQ8IUZ5 450 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 NAGSQ8N159 534 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 PBKQ96KB5 322 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 CCDC86Q9H6F5 360 aaKnown RBP13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 ETNK1Q9HBU6 452 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 HOMER3Q9NSC5 361 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 SIRPGQ9P1W8 387 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 GULP1Q9UBP9 304 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 DKK4Q9UBT3 224 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 APPL1Q9UKG1 709 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 CLCA2Q9UQC9 943 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 PLEKHM1Q9Y4G2 1056 aa13.21□□□□□ -0.29
HLA-DMA-202ENST00000395303 SMG1Q96Q15 3661 aaKnown RBP13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 BPTFQ12830 3046 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 GLYATL1P3A0A0U1RQE8 302 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 FAM149AA5PLN7 773 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 PRR19A6NJB7 356 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 C2orf81A6NN90 581 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 LDB2O43679 373 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 NUDT21O43809 227 aaKnown RBP13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 TCEA3O75764 348 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 SUN1O94901 812 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 CRTAMO95727 393 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 CXCR5P32302 372 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 ACTN2P35609 894 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 CLDN6P56747 220 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 XIAPP98170 497 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 NR1D2Q14995 579 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 CHRNA6Q15825 494 aa13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 KHDC1Q4VXA5 237 aaKnown RBP13.2□□□□□ -0.3
HLA-DMA-202ENST00000395303 MARK2Q7KZI7 788 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms