RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 PROSER1Q86XN7 944 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 PHYKPLQ8IUZ5 450 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 SFTPA2Q8IWL1 248 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 MDM1Q8TC05 714 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 ZDHHC1Q8WTX9 485 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 VPS35Q96QK1 796 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 TMEM121Q9BTD3 319 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 OR2AG1Q9H205 316 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 ARNT2Q9HBZ2 717 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 IL26Q9NPH9 171 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 ATXN10Q9UBB4 475 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 FEZ2Q9UHY8 353 aaPredicted RBP11.72□□□□□ -0.53
RFC4-202ENST00000392481 RABGEF1Q9UJ41 708 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 PKP3Q9Y446 797 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 PLEKHM1Q9Y4G2 1056 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 BPTFQ12830 3046 aa11.72□□□□□ -0.53
RFC4-202ENST00000392481 C2orf81A6NN90 581 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 NTN3O00634 580 aaPredicted RBP11.71□□□□□ -0.53
RFC4-202ENST00000392481 STX7O15400 261 aaKnown RBP11.71□□□□□ -0.53
RFC4-202ENST00000392481 LIASO43766 372 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 ZNF8P17098 575 aaPredicted RBP11.71□□□□□ -0.53
RFC4-202ENST00000392481 SPAM1P38567 509 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 SPIDRQ14159 915 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 TAF1AQ15573 450 aaPredicted RBP11.71□□□□□ -0.53
RFC4-202ENST00000392481 OASLQ15646 514 aaKnown RBP11.71□□□□□ -0.53
RFC4-202ENST00000392481 ISXQ2M1V0 245 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 P3H1Q32P28 736 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 ATP13A5Q4VNC0 1218 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 ADGRG6Q86SQ4 1221 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 BRSK1Q8TDC3 778 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 TBL1YQ9BQ87 522 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 APOL2Q9BQE5 337 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 TLR10Q9BXR5 811 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 LRIT1Q9P2V4 623 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 PCYT1BQ9Y5K3 369 aaPredicted RBP11.71□□□□□ -0.53
RFC4-202ENST00000392481 RNF215Q9Y6U7 377 aa11.71□□□□□ -0.53
RFC4-202ENST00000392481 CELSR3Q9NYQ7 3312 aa11.71□□□□□ -0.54
RFC4-202ENST00000392481 COL27A1Q8IZC6 1860 aaPredicted RBP11.71□□□□□ -0.54
RFC4-202ENST00000392481 CFAP47Q6ZTR5 3102 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 TAF4O00268 1085 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 CHUKO15111 745 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 PSMD3O43242 534 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 GRID2O43424 1007 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 VEGFDO43915 354 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 METTL18O95568 372 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 ECEL1O95672 775 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 LPOP22079 712 aaPredicted RBP11.7□□□□□ -0.54
RFC4-202ENST00000392481 GDF10P55107 478 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 MAZP56270 477 aaKnown RBP11.7□□□□□ -0.54
RFC4-202ENST00000392481 CCL7P80098 99 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 PDE1BQ01064 536 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 MSLNQ13421 630 aaPredicted RBP11.7□□□□□ -0.54
RFC4-202ENST00000392481 OLIG2Q13516 323 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 CHRNA6Q15825 494 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 DENND5AQ6IQ26 1287 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 CHST15Q7LFX5 561 aaPredicted RBP11.7□□□□□ -0.54
RFC4-202ENST00000392481 ZNF438Q7Z4V0 828 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 CCNJLQ8IV13 435 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 NAGSQ8N159 534 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 ARL14Q8N4G2 192 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 C19orf43Q9BQ61 176 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 LRRN3Q9H3W5 708 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 LRRC40Q9H9A6 602 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 ARFGAP3Q9NP61 516 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 PRKAB1Q9Y478 270 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 PCDHB1Q9Y5F3 818 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 ARL5AQ9Y689 179 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 AK5Q9Y6K8 562 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 FAM208BQ5VWN6 2430 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 KIF26BQ2KJY2 2108 aa11.7□□□□□ -0.54
RFC4-202ENST00000392481 GLYATL1P3A0A0U1RQE8 302 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 A0A1W2PQM1 296 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 SRRM3A6NNA2 597 aaPredicted RBP11.69□□□□□ -0.54
RFC4-202ENST00000392481 RHPN2P1A8MT19 583 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 D6RAR5 112 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 CASC3O15234 703 aaKnown RBP11.69□□□□□ -0.54
RFC4-202ENST00000392481 BUD23O43709 281 aaKnown RBP11.69□□□□□ -0.54
RFC4-202ENST00000392481 USP12O75317 370 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 CRTAMO95727 393 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 RPLP0P05388 317 aaKnown RBP11.69□□□□□ -0.54
RFC4-202ENST00000392481 ACP5P13686 325 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 GPR3P46089 330 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 CLCNKAP51800 687 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 ITGA9Q13797 1035 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 SPARCL1Q14515 664 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 NR1D2Q14995 579 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 CCNG2Q16589 344 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 ZNF648Q5T619 568 aaPredicted RBP11.69□□□□□ -0.54
RFC4-202ENST00000392481 FAM151BQ6UXP7 276 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 SPRED1Q7Z699 444 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 Q8N9G6 341 aaPredicted RBP11.69□□□□□ -0.54
RFC4-202ENST00000392481 MAIP1Q8WWC4 291 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 C1orf54Q8WWF1 131 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 PATE1Q8WXA2 126 aa11.69□□□□□ -0.54
RFC4-202ENST00000392481 GFM1Q96RP9 751 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms