RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FSCN2O14926 492 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SLC28A2O43868 658 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CCNT2O60583 730 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SCN2BO60939 215 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ERCC2P18074 760 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 WARSP23381 471 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ATP6V1E1P36543 226 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FASTKD3Q14CZ7 662 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 LACTB2Q53H82 288 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 TMEM220Q6QAJ8 160 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SYDE1Q6ZW31 735 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 HOMEZQ8IX15 550 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SMG8Q8ND04 991 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SHKBP1Q8TBC3 707 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF398Q8TD17 642 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF317Q96PQ6 595 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 HNRNPABQ99729 332 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 TTLL2Q9BWV7 592 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SUV39H2Q9H5I1 410 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 RERGLQ9H628 205 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 LRRC19Q9H756 370 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SGK2Q9HBY8 427 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF334Q9HCZ1 680 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 AGPAT4Q9NRZ5 378 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 PAK5Q9P286 719 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SLCO3A1Q9UIG8 710 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 RNF112Q9ULX5 631 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ENTPD4Q9Y227 616 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CDC14CA4D256 554 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 C5orf60A6NFR6 353 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 E9PAM4 449 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 F8W810 466 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ERAL1O75616 437 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SNRPB2P08579 225 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 HNRNPA2B1P22626 353 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SSTR1P30872 391 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FMO4P31512 558 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CLCNKAP51800 687 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 PRKAG1P54619 331 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CYP4F2P78329 520 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SRSF5Q13243 272 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 TRIP6Q15654 476 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SOWAHAQ2M3V2 549 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ZACNQ401N2 412 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ABHD17BQ5VST6 288 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CDCA2Q69YH5 1023 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 C3orf62Q6ZUJ4 267 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 C14orf80Q86SX3 495 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CAMK1DQ8IU85 385 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CKAP2Q8WWK9 683 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ZBP1Q9H171 429 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 HRASLS2Q9NWW9 162 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FNIP2Q9P278 1114 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ARMCX1Q9P291 453 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 COPS7AQ9UBW8 275 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 BCAP29Q9UHQ4 241 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 NUMA1Q14980 2115 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 DOPEY2Q9Y3R5 2298 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FAM149AA5PLN7 773 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 VEGFDO43915 354 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 DCTN3O75935 186 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 C5AR1P21730 350 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 BMP8BP34820 402 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 CYTH1Q15438 398 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 RSPO4Q2I0M5 234 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 PLXDC1Q8IUK5 500 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 AGGF1Q8N302 714 aaeCLIP6.51□□□□□ -1.376e-8■□□□□ 10.6
NEDD9-202ENST00000379446 RIBC1Q8N443 379 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 AGBL5Q8NDL9 886 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FAM13CQ8NE31 585 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 C8orf48Q96LL4 319 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 PCYT2Q99447 389 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SLC46A2Q9BY10 475 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FAM126AQ9BYI3 521 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 RXFP1Q9HBX9 757 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 DNAAF2Q9NVR5 837 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 NDE1Q9NXR1 346 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 COQ3Q9NZJ6 369 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 ZC3H7BQ9UGR2 993 aaKnown RBP6.51□□□□□ -1.37
NEDD9-202ENST00000379446 FBXW11Q9UKB1 542 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 SNX6Q9UNH7 406 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 TMEM98Q9Y2Y6 226 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 RTTNQ86VV8 2226 aa6.51□□□□□ -1.37
NEDD9-202ENST00000379446 PRAMEF26H0Y7S4 382 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 PLK4O00444 970 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SIN3BO75182 1162 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 EGFP01133 1207 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 KCNE1P15382 129 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CMPK1P30085 196 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SLC6A11P48066 632 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 STK19P49842 368 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 YBEYP58557 167 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-202ENST00000379446 GCNT1Q02742 428 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 CYP4F3Q08477 520 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 MYBPHQ13203 477 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 ST3GAL2Q16842 350 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 AP5B1Q2VPB7 878 aa6.5□□□□□ -1.37
NEDD9-202ENST00000379446 SH3PXD2AQ5TCZ1 1133 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms