RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 C7orf61Q8IZ16 206 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ZNF548Q8NEK5 533 aaPredicted RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 OR9I1Q8NGQ6 314 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 GLT1D1Q96MS3 346 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TBL1YQ9BQ87 522 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 FZD3Q9NPG1 666 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 RIC8BQ9NVN3 520 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 GPATCH2Q9NW75 528 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 SMPD4Q9NXE4 827 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ACTR3BQ9P1U1 418 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 GIT1Q9Y2X7 761 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CDY2AQ9Y6F7 541 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CDY1Q9Y6F8 540 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 RPS6KL1Q9Y6S9 549 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 DSPPQ9NZW4 1301 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 AP1G2O75843 785 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CNTN5O94779 1100 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 BDNFP23560 247 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 HTR1EP28566 365 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TAF6P49848 677 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 AP2B1P63010 937 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CDH17Q12864 832 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 PRKAA1Q13131 559 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 PCBP2Q15366 365 aaKnown RBP eCLIP7.79□□□□□ -1.165e-7■■■■□ 24.4
CNOT4-201ENST00000315544 MUM1Q2TAK8 710 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 PDCD4Q53EL6 469 aaKnown RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 OR6B2Q6IFH4 312 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TRIM67Q6ZTA4 783 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 PIM3Q86V86 326 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 CRLF3Q8IUI8 442 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 TTC9BQ8N6N2 239 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 KIAA1191Q96A73 305 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 ECHDC3Q96DC8 303 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 FAM161BQ96MY7 647 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 NPAS2Q99743 824 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 SH3GL3Q99963 347 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 MIS12Q9H081 205 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 HIPK3Q9H422 1215 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 FAM96AQ9H5X1 160 aa7.79□□□□□ -1.16
CNOT4-201ENST00000315544 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
CNOT4-201ENST00000315544 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 E9PAM4 449 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SPECC1L-ADORA2AF8WAN1 911 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SLCO1B7G3V0H7 640 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 STX16O14662 325 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SEMA7AO75326 666 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 NPPAP01160 153 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 PDHA1P08559 390 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 PRSS56P0CW18 603 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 GFAPP14136 432 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 ETV6P41212 452 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 GP2P55259 537 aaKnown RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 B4GALNT1Q00973 533 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 HKDC1Q2TB90 917 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 ANKDD1AQ495B1 522 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SV2CQ496J9 727 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 FYB2Q5VWT5 728 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 HEATR6Q6AI08 1181 aaKnown RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 PDE12Q6L8Q7 609 aaKnown RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SLC30A9Q6PML9 568 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 GK5Q6ZS86 529 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 ZSWIM9Q86XI8 627 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 LRRC49Q8IUZ0 686 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 CHCHD4Q8N4Q1 142 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 LRTOMTQ8WZ04 291 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 PGBD4Q96DM1 585 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 LYSMD1Q96S90 227 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 DHX35Q9H5Z1 703 aaKnown RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 FAM105AQ9NUU6 356 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 ATXN10Q9UBB4 475 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 LHX3Q9UBR4 397 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 EBF1Q9UH73 591 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 C1orf226A1L170 272 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 LOC730098B7Z3J9 87 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SLC16A6O15403 523 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 KLKB1P03952 638 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 USP17L7P0C7H9 530 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 JAK1P23458 1154 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 PAX3P23760 479 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SULT1E1P49888 294 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 STC1P52823 247 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SLC10A7Q0GE19 358 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SLC14A1Q13336 389 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 PMS2P3Q13401 168 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 RAB30Q15771 203 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 CDO1Q16878 200 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 GLRA4Q5JXX5 417 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 ZFAND4Q86XD8 727 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SNX32Q86XE0 403 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 LRRC56Q8IYG6 542 aaPredicted RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 FAM156AQ8NDB6 213 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 MYLPFQ96A32 169 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 SENP8Q96LD8 212 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 TUBA1CQ9BQE3 449 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 AARSD1Q9BTE6 412 aaKnown RBP7.78□□□□□ -1.16
CNOT4-201ENST00000315544 AP5M1Q9H0R1 490 aa7.78□□□□□ -1.16
CNOT4-201ENST00000315544 WDR41Q9HAD4 459 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms