RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TRIM39Q9HCM9 518 aa26.19■■□□□ 1.78
CDKN2A-201ENST00000304494 GOLGA6L9A6NEM1 432 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 AURKAO14965 403 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 CCKBRP32239 447 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 ABCG1P45844 678 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 GPR3P46089 330 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 PCBP4P57723 403 aaKnown RBP26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 EIF3IQ13347 325 aaKnown RBP26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 NR1D2Q14995 579 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 AADACL2Q6P093 401 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 RNF10Q8N5U6 811 aaKnown RBP26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 TTC13Q8NBP0 860 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 EPB41L5Q9HCM4 733 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 AAR2Q9Y312 384 aaKnown RBP26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 PRKAB1Q9Y478 270 aa26.18■■□□□ 1.78
CDKN2A-201ENST00000304494 KCNN4O15554 427 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 NUAK1O60285 661 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 FTCDO95954 541 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 MLLT3P42568 568 aaPredicted RBP26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 CHRNA4P43681 627 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 B4GALNT1Q00973 533 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 GLT6D1Q7Z4J2 308 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 B3GNT8Q7Z7M8 397 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 ZNF248Q8NDW4 579 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 PATE1Q8WXA2 126 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 SLC46A1Q96NT5 459 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 PPP1R2P1Q96PQ5 205 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 TSGA10Q9BZW7 698 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 ASCL3Q9NQ33 180 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 ATXN10Q9UBB4 475 aa26.17■■□□□ 1.78
CDKN2A-201ENST00000304494 A0A0U1RQJ8 604 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 A0A1W2PNU3 283 aaPredicted RBP26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 GRID2O43424 1007 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 PRPSAP1Q14558 356 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 CLPPQ16740 277 aaPredicted RBP26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 ANKRD20A2Q5SQ80 823 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 ANKRD20A1Q5TYW2 823 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 ANKRD20A3Q5VUR7 823 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 FOXR1Q6PIV2 292 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 BLOC1S5Q8TDH9 187 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 VPS35Q96QK1 796 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 FAM118BQ9BPY3 351 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 FOXP3Q9BZS1 431 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 OR2AG1Q9H205 316 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 BPIFA1Q9NP55 256 aa26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 ATXN7L1Q9ULK2 861 aaPredicted RBP26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 PACSIN2Q9UNF0 486 aaPredicted RBP26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 PCYT1BQ9Y5K3 369 aaPredicted RBP26.16■■□□□ 1.78
CDKN2A-201ENST00000304494 ACP5P13686 325 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 ZNF8P17098 575 aaPredicted RBP26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 ALDH4A1P30038 563 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 MAP9Q49MG5 647 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 TTC30BQ8N4P2 665 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 DTX3LQ8TDB6 740 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 TMEM159Q96B96 161 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 PRR11Q96HE9 360 aaPredicted RBP26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 ARFGAP3Q9NP61 516 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 PKP3Q9Y446 797 aa26.15■■□□□ 1.78
CDKN2A-201ENST00000304494 CHD6Q8TD26 2715 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 PLD2O14939 933 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 DDX3YO15523 660 aaKnown RBP26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 B4GAT1O43505 415 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 VEGFDO43915 354 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 PPFIA2O75334 1257 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 CPNE6O95741 557 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 SLC2A4P14672 509 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 OR1D5P58170 312 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 ZFP36L1Q07352 338 aaKnown RBP26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 RAB11FIP2Q7L804 512 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 ADGRG6Q86SQ4 1221 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 PIM3Q86V86 326 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 SFRP1Q8N474 314 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 UBE2Q2Q8WVN8 375 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 LRRC45Q96CN5 670 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 HES6Q96HZ4 224 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 SPATA13Q96N96 652 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 FICDQ9BVA6 458 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 IL17CQ9P0M4 197 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 KCNK6Q9Y257 313 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 ADGRG1Q9Y653 693 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 CAPN6Q9Y6Q1 641 aa26.14■■□□□ 1.78
CDKN2A-201ENST00000304494 URB1O60287 2271 aaKnown RBP26.14■■□□□ 1.77
CDKN2A-201ENST00000304494 ADAMTS20P59510 1910 aa26.14■■□□□ 1.77
CDKN2A-201ENST00000304494 CHUKO15111 745 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 KRT86O43790 486 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 TNFSF15O95150 251 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 AGTP01019 485 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 ITGA2BP08514 1039 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 PSMB4P28070 264 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 SPAM1P38567 509 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 FASLGP48023 281 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 CCDC173Q0VFZ6 552 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 AMZ1Q400G9 498 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 FBXO39Q8N4B4 442 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 GORASP1Q9BQQ3 440 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 STN1Q9H668 368 aaKnown RBP26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 IL26Q9NPH9 171 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 TBC1D29Q9UFV1 150 aa26.13■■□□□ 1.77
CDKN2A-201ENST00000304494 ARHGEF17Q96PE2 2063 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms