RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ACAP2Q15057 778 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 FAM98BQ52LJ0 330 aaKnown RBP10.21□□□□□ -0.77
LMX1A-201ENST00000294816 FBXO47Q5MNV8 452 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 NOL9Q5SY16 702 aaKnown RBP10.21□□□□□ -0.77
LMX1A-201ENST00000294816 ARMCX6Q7L4S7 300 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 CHDHQ8NE62 594 aaPredicted RBP10.21□□□□□ -0.77
LMX1A-201ENST00000294816 APPL2Q8NEU8 664 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 PPP1R13LQ8WUF5 828 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 VAT1Q99536 393 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 TLR9Q9NR96 1032 aa10.21□□□□□ -0.77
LMX1A-201ENST00000294816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
LMX1A-201ENST00000294816 TBX1O43435 398 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 CNTN5O94779 1100 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 C1RP00736 705 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 USP17L7P0C7H9 530 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 UMPSP11172 480 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 HRH2P25021 359 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 CDKN2DP55273 166 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 KCNAB2Q13303 367 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 CTU2Q2VPK5 515 aaKnown RBP10.21□□□□□ -0.78
LMX1A-201ENST00000294816 PLA2G4EQ3MJ16 856 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 UGT3A1Q6NUS8 523 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 CNIH3Q8TBE1 160 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 SH3RF2Q8TEC5 729 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 HDAC2Q92769 488 aaKnown RBP10.21□□□□□ -0.78
LMX1A-201ENST00000294816 FKBP10Q96AY3 582 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 ZNF641Q96N77 438 aaPredicted RBP10.21□□□□□ -0.78
LMX1A-201ENST00000294816 CTRCQ99895 268 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 PSD2Q9BQI7 771 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 TRMOQ9BU70 441 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 RBM22Q9NW64 420 aaKnown RBP eCLIP10.21□□□□□ -0.78
LMX1A-201ENST00000294816 FAM118AQ9NWS6 357 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 LIMD1Q9UGP4 676 aa10.21□□□□□ -0.78
LMX1A-201ENST00000294816 TSPAN1O60635 241 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 UGT2B11O75310 529 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CHEK2O96017 543 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CST1P01037 141 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 HTR1AP08908 422 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 POLD2P49005 469 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CLCN5P51795 746 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 GP2P55259 537 aaKnown RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 COPZ1P61923 177 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CELF3Q5SZQ8 465 aaKnown RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ZNF772Q68DY9 489 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 GADL1Q6ZQY3 521 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 TAS2R42Q7RTR8 314 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ARMC8Q8IUR7 673 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CCDC103Q8IW40 242 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 PTERQ96BW5 349 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 FAM49AQ9H0Q0 323 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 GLOD4Q9HC38 313 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 RGS18Q9NS28 235 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 A0A1W2PP18 115 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CAPN15O75808 1086 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 C22orf31O95567 290 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ALPLP05186 524 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CYP4B1P13584 511 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 PAX3P23760 479 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 DNAJB1P25685 340 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 FMO3P31513 532 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 TGFBR1P36897 503 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 GEMP55040 296 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 HERVK_113P63132 956 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 DPY19L1Q2PZI1 675 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ADPRMQ3LIE5 342 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 C9orf57Q5W0N0 161 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CNTN4Q8IWV2 1026 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 MINDY2Q8NBR6 621 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CHST13Q8NET6 341 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 MCOLN3Q8TDD5 553 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 NUDT8Q8WV74 236 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ELMO1Q92556 727 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 EFHD2Q96C19 240 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 HBEGFQ99075 208 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 C17orf80Q9BSJ5 609 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ERVK-6Q9BXR3 956 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ALOXE3Q9BYJ1 711 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 NACA2Q9H009 215 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 TP63Q9H3D4 680 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 TUBB1Q9H4B7 451 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 NTN4Q9HB63 628 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 DNMT3BQ9UBC3 853 aaKnown RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 KLHL3Q9UH77 587 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 LEF1Q9UJU2 399 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CSADQ9Y600 493 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 SLC22A3O75751 556 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CDH1P12830 882 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 SCNN1AP37088 669 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ILF2Q12905 390 aaKnown RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CTF1Q16619 201 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 COLEC12Q5KU26 742 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 CATSPEREQ5SY80 951 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 TMEM207Q6UWW9 146 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 DNAJC14Q6Y2X3 702 aaPredicted RBP10.2□□□□□ -0.78
LMX1A-201ENST00000294816 TFAP2DQ7Z6R9 452 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 GALNT5Q7Z7M9 940 aa10.2□□□□□ -0.78
LMX1A-201ENST00000294816 ISCA2Q86U28 154 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms