RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 TufmQ8BFR5 452 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Csnk1g1Q8BTH8 459 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Slc35c2Q8VCX2 364 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Olfr532Q8VGT4 309 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Trmt11Q9CWH5 460 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Mbtps1Q9WTZ2 1052 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Bcl10Q9Z0H7 233 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Gm3604A0A087WPN2 559 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Olfr620E9PZ66 313 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Fgf10O35565 209 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Limk2O54785 638 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 ClppO88696 272 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 PthlhP22858 175 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cbx3P23198 183 aaKnown RBP17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Pcbp1P60335 356 aaKnown RBP17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 ErfP70459 551 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Gpatch4Q3TFK5 415 aaKnown RBP17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Mrps35Q8BJZ4 320 aaKnown RBP17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 NcaphQ8C156 731 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cacnb2Q8CC27 655 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cdkal1Q91WE6 578 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Wfdc1Q9ESH5 211 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Pik3cgQ9JHG7 1102 aa17.31■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Znf106O88466 1888 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Slc6a21A0A1B0GSD2 748 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Itih4A6X935 942 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Gdf7P43029 461 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Atoh1P48985 351 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Slc11a2P49282 568 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Drd4P51436 387 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 TgfbiP82198 683 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Psme2P97372 239 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Kcnab3P97382 249 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Zc3h15Q3TIV5 426 aaKnown RBP17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Q3V0E1 1183 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 KrtdapQ3V2T4 102 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Mrm3Q5ND52 418 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Fzd6Q61089 709 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 TsnQ62348 228 aaKnown RBP17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Kir3dl2Q673W2 388 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Lingo3Q6GQU6 589 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Teddm1aQ810U2 305 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Hspa13Q8BM72 471 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Ifi205aQ8CGE8 404 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Setd7Q8VHL1 366 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Tmem135Q9CYV5 458 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Hddc3Q9D114 179 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 SgshQ9EQ08 502 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cldn19Q9ET38 224 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Sh3glb1Q9JK48 365 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Vmn2r53L7N473 806 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Ldb2O55203 373 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Mtnd4P03911 459 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cdh1P09803 884 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 CtsdP18242 410 aaKnown RBP17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Ndst2P52850 883 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Krt2Q3TTY5 707 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Trappc9Q3U0M1 1148 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Trim40Q3UWA4 246 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Rbbp7Q60973 425 aaKnown RBP17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 CcnhQ61458 323 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cdc14bQ6PFY9 485 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Tdpoz3Q717B4 365 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Olfr1128Q7TR47 311 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Pex26Q8BGI5 305 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 D3Ertd751eQ8BGN2 192 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Parp12Q8BZ20 711 aaKnown RBP17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Kcnv1Q8BZN2 503 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 NlnQ91YP2 704 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 DeraQ91YP3 318 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Q9D1K7 174 aaKnown RBP17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Bpifa3Q9D9J8 232 aa17.3■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Ttll9A2APC3 461 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Igf2bp1O88477 577 aaKnown RBP17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Ppp3ccP48455 513 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Uba1Q02053 1058 aaKnown RBP17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Brms1lQ3U1T3 323 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Zfp418Q8BFS8 652 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Nrn1lQ8C4W3 162 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Zbtb6Q8K088 423 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Acap1Q8K2H4 740 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Pycr2Q922Q4 320 aaKnown RBP17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Snrnp48Q9D361 337 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Padi4Q9Z183 666 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Gm21964A0A1W2P7S4 437 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Speer4cG3UXD1 256 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Gm10354K7N6A0 256 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 GzmkO35205 263 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Hoxb13P70321 286 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cdh6P97326 790 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Zmat1Q3V0C1 714 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Zfp78Q5U406 512 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cntn2Q61330 1040 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Fscn1Q61553 493 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Cdh7Q8BM92 785 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Sfr1Q8BP27 319 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Slc45a3Q8K0H7 553 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Ppp1r8Q8R3G1 351 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 AcmsdQ8R519 336 aa17.29■□□□□ 0.36
Ckap4-202ENSMUST00000167671 Slc35a5Q921R7 437 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms