RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TMPRSS12Q86WS5 348 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 CCL4L1Q8NHW4 92 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 DTX3LQ8TDB6 740 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 OR2M4Q96R27 311 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 GSDMCQ9BYG8 508 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 SUDS3Q9H7L9 328 aaPredicted RBP22.68■■□□□ 1.22
TDP1-216ENST00000556867 LRRC40Q9H9A6 602 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 BPIFA1Q9NP55 256 aa22.68■■□□□ 1.22
TDP1-216ENST00000556867 FEZ2Q9UHY8 353 aaPredicted RBP22.68■■□□□ 1.22
TDP1-216ENST00000556867 AKAP13Q12802 2813 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 PPFIA2O75334 1257 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 ASMTLO95671 621 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 ATP1A1P05023 1023 aaKnown RBP22.67■■□□□ 1.22
TDP1-216ENST00000556867 ADCY8P40145 1251 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 MSLNQ13421 630 aaPredicted RBP22.67■■□□□ 1.22
TDP1-216ENST00000556867 SNX1Q13596 522 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 PYCR3Q53H96 274 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 CCNI2Q6ZMN8 369 aaPredicted RBP22.67■■□□□ 1.22
TDP1-216ENST00000556867 NRROSQ86YC3 692 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 KYQ8NBH2 561 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 IFI44Q8TCB0 444 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 NAT6Q93015 286 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 GLYATL1Q969I3 302 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.67■■□□□ 1.22
TDP1-216ENST00000556867 PKP3Q9Y446 797 aa22.67■■□□□ 1.22
TDP1-216ENST00000556867 PSMD3O43242 534 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 DNAJC6O75061 913 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 USP12O75317 370 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 AP2A1O95782 977 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 SPAM1P38567 509 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 SPARCL1Q14515 664 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 TAF1AQ15573 450 aaPredicted RBP22.66■■□□□ 1.22
TDP1-216ENST00000556867 OGFOD3Q6PK18 319 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 MARK2Q7KZI7 788 aaKnown RBP22.66■■□□□ 1.22
TDP1-216ENST00000556867 EFL1Q7Z2Z2 1120 aaKnown RBP22.66■■□□□ 1.22
TDP1-216ENST00000556867 GALNT13Q8IUC8 556 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 PHYKPLQ8IUZ5 450 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 SLC35F6Q8N357 371 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 FAM46DQ8NEK8 389 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 GPR156Q8NFN8 814 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 VPS35Q96QK1 796 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 TMEM121BQ9BXQ6 578 aaPredicted RBP22.66■■□□□ 1.22
TDP1-216ENST00000556867 RMI1Q9H9A7 625 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 IL26Q9NPH9 171 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 TRMT1Q9NXH9 659 aaKnown RBP22.66■■□□□ 1.22
TDP1-216ENST00000556867 SIRPGQ9P1W8 387 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 PADI4Q9UM07 663 aa22.66■■□□□ 1.22
TDP1-216ENST00000556867 CPED1A4D0V7 1026 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 SLC25A14O95258 325 aaPredicted RBP22.65■■□□□ 1.22
TDP1-216ENST00000556867 IFNB1P01574 187 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 LPOP22079 712 aaPredicted RBP22.65■■□□□ 1.22
TDP1-216ENST00000556867 MSNP26038 577 aaKnown RBP22.65■■□□□ 1.22
TDP1-216ENST00000556867 INSM1Q01101 510 aaPredicted RBP22.65■■□□□ 1.22
TDP1-216ENST00000556867 CTBSQ01459 385 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 LRP8Q14114 963 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 GSE1Q14687 1217 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 LONRF2Q1L5Z9 754 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 HES3Q5TGS1 186 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 RASGEF1CQ8N431 466 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 BRSK1Q8TDC3 778 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 GATA6Q92908 595 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 PBKQ96KB5 322 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 GULP1Q9UBP9 304 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 DRG1Q9Y295 367 aaKnown RBP22.65■■□□□ 1.22
TDP1-216ENST00000556867 GPSM3Q9Y4H4 160 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 ST14Q9Y5Y6 855 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 ARL5AQ9Y689 179 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 MYLKQ15746 1914 aa22.65■■□□□ 1.22
TDP1-216ENST00000556867 C2orf81A6NN90 581 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 ERI2A8K979 691 aaKnown RBP22.64■■□□□ 1.21
TDP1-216ENST00000556867 GPR89AB7ZAQ6 455 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 STX7O15400 261 aaKnown RBP22.64■■□□□ 1.21
TDP1-216ENST00000556867 BUD23O43709 281 aaKnown RBP22.64■■□□□ 1.21
TDP1-216ENST00000556867 KIF5CO60282 957 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 OPA1O60313 960 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 NOBOXO60393 691 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 CRTAMO95727 393 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 GPR89BP0CG08 455 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 AK4P27144 223 aaPredicted RBP22.64■■□□□ 1.21
TDP1-216ENST00000556867 ACTN2P35609 894 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 FDFT1P37268 417 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 ATP13A5Q4VNC0 1218 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 CACTIN-AS1Q8N1I8 211 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 PDCD7Q8N8D1 485 aaKnown RBP22.64■■□□□ 1.21
TDP1-216ENST00000556867 CCDC89Q8N998 374 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 C19orf43Q9BQ61 176 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 TRIM39Q9HCM9 518 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 HOMER3Q9NSC5 361 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 TAAR2Q9P1P5 351 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 ATXN10Q9UBB4 475 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 TMPRSS11EQ9UL52 423 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 PCYT1BQ9Y5K3 369 aaPredicted RBP22.64■■□□□ 1.21
TDP1-216ENST00000556867 FRYQ5TBA9 3013 aa22.64■■□□□ 1.21
TDP1-216ENST00000556867 GLYATL1P3A0A0U1RQE8 302 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 GAPDHSO14556 408 aaPredicted RBP22.63■■□□□ 1.21
TDP1-216ENST00000556867 NUAK1O60285 661 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 CLDN6P56747 220 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 PDE1BQ01064 536 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 PEX6Q13608 980 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 PERM1Q5SV97 790 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms