RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CBFA2T3O75081 653 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 PHF2O75151 1096 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SUN1O94901 812 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SLC25A14O95258 325 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 TRIM16O95361 564 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 LDOC1O95751 146 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SOD1P00441 154 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 CEACAM5P06731 702 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 APRTP07741 180 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SPAM1P38567 509 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 FNTAP49354 379 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 MSLNQ13421 630 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 C1orf61Q13536 156 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 LAMB3Q13751 1172 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 ELOCQ15369 112 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 TRIP13Q15645 432 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 ALG11Q2TAA5 492 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 ALS2CLQ60I27 953 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 PDPK2PQ6A1A2 396 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 CREG2Q8IUH2 290 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 FSTL5Q8N475 847 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 TTC30BQ8N4P2 665 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 CHCHD4Q8N4Q1 142 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 OR52K1Q8NGK4 314 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 CAPZA3Q96KX2 299 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 C19orf43Q9BQ61 176 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 TRIM39Q9HCM9 518 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 CYP4F12Q9HCS2 524 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 IL26Q9NPH9 171 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 UCKL1Q9NWZ5 548 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SMARCAL1Q9NZC9 954 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 NFKBIL1Q9UBC1 381 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-225ENST00000551845 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 SLC17A4Q9Y2C5 497 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 TMEM98Q9Y2Y6 226 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 ARL5AQ9Y689 179 aa10.55□□□□□ -0.72
PTCH1-225ENST00000551845 ANKRD11Q6UB99 2663 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 GLYATL1P3A0A0U1RQE8 302 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 YY2O15391 372 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TNFSF14O43557 240 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TUBB4AP04350 444 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 ANXA6P08133 673 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 HADHAP40939 763 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 POLD2P49005 469 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 CDK16Q00536 496 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 GPS1Q13098 491 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 ITGA9Q13797 1035 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 SKIDA1Q1XH10 827 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TTC27Q6P3X3 843 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 DOK6Q6PKX4 331 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 LVRNQ6Q4G3 990 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 SYT10Q6XYQ8 523 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 KANSL1Q7Z3B3 1105 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 GKN2Q86XP6 184 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 RBFAQ8N0V3 343 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 ZNF548Q8NEK5 533 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 OR4K2Q8NGD2 314 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 ZNF398Q8TD17 642 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 OR1E3Q8WZA6 343 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 COX14Q96I36 57 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 CNDP2Q96KP4 475 aaKnown RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TTC25Q96NG3 672 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 RUNDC3BQ96NL0 473 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TRPM6Q9BX84 2022 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TCEAL2Q9H3H9 227 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 CARS2Q9HA77 564 aaKnown RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 MRPL40Q9NQ50 206 aaKnown RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TRNAU1APQ9NX07 287 aaKnown RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 FTSJ1Q9UET6 329 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 CNOT6Q9ULM6 557 aaKnown RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 PNMA8BQ9ULN7 279 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-225ENST00000551845 BTBD3Q9Y2F9 522 aa10.54□□□□□ -0.72
PTCH1-225ENST00000551845 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 PRSS38A1L453 326 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 FADS2P1A8MWK0 482 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 LMO7DNF2Z398 122 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 CCDC188H7C350 402 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 TRIM38O00635 465 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 FFAR2O15552 330 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 LDB2O43679 373 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 SIGLEC6O43699 453 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 ECEL1O95672 775 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 FUCA1P04066 466 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 IVLP07476 585 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 CKMT2P17540 419 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 ADRA1DP25100 572 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 GRIA1P42261 906 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 GNPDA1P46926 289 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 NPY2RP49146 381 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 VPS41P49754 854 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 DUSP3P51452 185 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-225ENST00000551845 TMPRSS15P98073 1019 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 PEX6Q13608 980 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 PTPRCAPQ14761 206 aa10.53□□□□□ -0.72
PTCH1-225ENST00000551845 PPP1R7Q15435 360 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms