RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 GALNT13Q8IUC8 556 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 TRAM1L1Q8N609 369 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 GPR26Q8NDV2 337 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 OXNAD1Q96HP4 312 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 PLEKHG4BQ96PX9 1271 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 OR2M4Q96R27 311 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 TRIM39Q9HCM9 518 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPATS2LQ9NUQ6 558 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 TAAR2Q9P1P5 351 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 AAR2Q9Y312 384 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPO11Q9Y5K1 396 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 AK5Q9Y6K8 562 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 CAPN6Q9Y6Q1 641 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 CACNA1BQ00975 2339 aa12.02□□□□□ -0.49
TRAPPC4-209ENST00000528230 KMT2BQ9UMN6 2715 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 C5orf60A6NFR6 353 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 TMX2-CTNND1H3BSU7 103 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 KCNN4O15554 427 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZW10O43264 779 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 NUAK1O60285 661 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 DNAJC6O75061 913 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 ASMTLO95671 621 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 BPIP17213 487 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 AK4P27144 223 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 KLF1Q13351 362 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPIDRQ14159 915 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 PRPSAP1Q14558 356 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 RANBP10Q6VN20 620 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 TRIM74Q86UV6 250 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 LRRC8AQ8IWT6 810 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 LSMEM2Q8N112 164 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 IPMKQ8NFU5 416 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZDHHC1Q8WTX9 485 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCDC74AQ96AQ1 378 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPATA13Q96N96 652 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 SPATA16Q9BXB7 569 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 FSD1LQ9BXM9 530 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 CARD9Q9H257 536 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 LRRN3Q9H3W5 708 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 C10orf88Q9H8K7 445 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 LRIT1Q9P2V4 623 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 GUCA1BQ9UMX6 200 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 PACSIN2Q9UNF0 486 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 ST14Q9Y5Y6 855 aa12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 OAS3Q9Y6K5 1087 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-209ENST00000528230 EPG5Q9HCE0 2579 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 B4DGG1 531 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 AURKAO14965 403 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 USP12O75317 370 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC25A14O95258 325 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ACTR1BP42025 376 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 LSSP48449 732 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ACTR1AP61163 376 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 NR1D2Q14995 579 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 CLPPQ16740 277 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZNF569Q5MCW4 686 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC30A9Q6PML9 568 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 KLHDC8BQ8IXV7 354 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ARL14Q8N4G2 192 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 TTC30BQ8N4P2 665 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 SLC35B2Q8TB61 432 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 GLYATL1Q969I3 302 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 VPS35Q96QK1 796 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 C19orf43Q9BQ61 176 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 SUDS3Q9H7L9 328 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-209ENST00000528230 POLR1BQ9H9Y6 1135 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 IL17CQ9P0M4 197 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ZNHIT2Q9UHR6 403 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 PCDHB1Q9Y5F3 818 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ENTPD2Q9Y5L3 495 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 RNF215Q9Y6U7 377 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 URB1O60287 2271 aaKnown RBP12□□□□□ -0.49
TRAPPC4-209ENST00000528230 USP24Q9UPU5 2620 aa12□□□□□ -0.49
TRAPPC4-209ENST00000528230 ACACAQ13085 2346 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 FRYQ5TBA9 3013 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 A0A1W2PQM1 296 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CHUKO15111 745 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 GRID2O43424 1007 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 NRDCO43847 1150 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 VEGFDO43915 354 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 KRT37O76014 449 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 DXOO77932 396 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ECEL1O95672 775 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 AGTP01019 485 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCDC175P0C221 793 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 PSMB4P28070 264 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ADRA1AP35348 466 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 ACTN2P35609 894 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CHRNA4P43681 627 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 GPR3P46089 330 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CLCNKAP51800 687 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 CCL7P80098 99 aa11.99□□□□□ -0.49
TRAPPC4-209ENST00000528230 B4GALNT1Q00973 533 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms