RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RSPH14Q9UHP6 348 aa9.64□□□□□ -0.87
RNF4-221ENST00000513643 APPL1Q9UKG1 709 aa9.64□□□□□ -0.87
RNF4-221ENST00000513643 PADI4Q9UM07 663 aa9.64□□□□□ -0.87
RNF4-221ENST00000513643 TMEM98Q9Y2Y6 226 aa9.64□□□□□ -0.87
RNF4-221ENST00000513643 AAR2Q9Y312 384 aaKnown RBP9.64□□□□□ -0.87
RNF4-221ENST00000513643 ITPR1Q14643 2758 aa9.64□□□□□ -0.87
RNF4-221ENST00000513643 A6NCN8 305 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 TMEM8BA6NDV4 472 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 GOLGA6L9A6NEM1 432 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 AGAP14A8MT82 685 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 GPR89AB7ZAQ6 455 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CASC3O15234 703 aaKnown RBP9.63□□□□□ -0.87
RNF4-221ENST00000513643 NUAK1O60285 661 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 PPFIA2O75334 1257 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 GPR89BP0CG08 455 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CTSEP14091 401 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 PNLIPP16233 465 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CA5AP35218 305 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 RPIAP49247 311 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CLCNKAP51800 687 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 DAB2P98082 770 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CTBSQ01459 385 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 TARDBPQ13148 414 aaKnown RBP eCLIP9.63□□□□□ -0.87
RNF4-221ENST00000513643 OLIG2Q13516 323 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 LRP8Q14114 963 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 NR1D2Q14995 579 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 RTP5Q14D33 572 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CCNG2Q16589 344 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 P3H1Q32P28 736 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CERCAMQ5T4B2 595 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 HES3Q5TGS1 186 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CCDC181Q5TID7 509 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CCDC70Q6NSX1 233 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 TRIM74Q86UV6 250 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 SFTPA2Q8IWL1 248 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 IPMKQ8NFU5 416 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 IFI44Q8TCB0 444 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 SCG3Q8WXD2 468 aaKnown RBP9.63□□□□□ -0.87
RNF4-221ENST00000513643 ATG4AQ8WYN0 398 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 GLMNQ92990 594 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 NAT6Q93015 286 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 PPP1R2P1Q96PQ5 205 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 FERMT1Q9BQL6 677 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 TMEM121Q9BTD3 319 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 GPR63Q9BZJ6 419 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 CARS2Q9HA77 564 aaKnown RBP9.63□□□□□ -0.87
RNF4-221ENST00000513643 TRIM39Q9HCM9 518 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 GPR34Q9UPC5 381 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 DRG1Q9Y295 367 aaKnown RBP9.63□□□□□ -0.87
RNF4-221ENST00000513643 PLEKHM1Q9Y4G2 1056 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 ZFYVE26Q68DK2 2539 aa9.63□□□□□ -0.87
RNF4-221ENST00000513643 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
RNF4-221ENST00000513643 URB1O60287 2271 aaKnown RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 NBEAQ8NFP9 2946 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 FAM149AA5PLN7 773 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 TRABD2BA6NFA1 517 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 NUDT21O43809 227 aaKnown RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 MT-CO3P00414 261 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 ATP1A1P05023 1023 aaKnown RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 GLB1P16278 677 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 GNPDA1P46926 289 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 XIAPP98170 497 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 SQSTM1Q13501 440 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 TAF1AQ15573 450 aaPredicted RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 ATP13A5Q4VNC0 1218 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 KHDC1Q4VXA5 237 aaKnown RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 HS1BP3Q53T59 392 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 ZDHHC20Q5W0Z9 365 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 EFL1Q7Z2Z2 1120 aaKnown RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 TAF8Q7Z7C8 310 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 C11orf96Q7Z7L8 435 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 ADGRG6Q86SQ4 1221 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 ZNF547Q8IVP9 402 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 NAGSQ8N159 534 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 SLC25A41Q8N5S1 370 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 KYQ8NBH2 561 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 FAM46DQ8NEK8 389 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 OR6C4Q8NGE1 309 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 BRSK1Q8TDC3 778 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 GLYATL1Q969I3 302 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 GRAMD1AQ96CP6 724 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 OR2M4Q96R27 311 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 SMOXQ9NWM0 555 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.62□□□□□ -0.87
RNF4-221ENST00000513643 TAAR2Q9P1P5 351 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 FEZ2Q9UHY8 353 aaPredicted RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 TTC7AQ9ULT0 858 aaPredicted RBP9.62□□□□□ -0.87
RNF4-221ENST00000513643 ZKSCAN5Q9Y2L8 839 aa9.62□□□□□ -0.87
RNF4-221ENST00000513643 A0A1W2PNU3 283 aaPredicted RBP9.61□□□□□ -0.87
RNF4-221ENST00000513643 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 CPED1A4D0V7 1026 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 F5H423 210 aaPredicted RBP9.61□□□□□ -0.87
RNF4-221ENST00000513643 INPP4BO15327 924 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms