RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	GPHA2	Q96T91	129 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	CMKLR1	Q99788	373 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	RNF26	Q9BY78	433 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	RSPH9	Q9H1X1	276 aa	Predicted RBP	7.65	□□□□□ -1.18
CAST-231	ENST00000510245	TMEM60	Q9H2L4	133 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	BCO1	Q9HAY6	547 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	TUFT1	Q9NNX1	390 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	SUN2	Q9UH99	717 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	CA5B	Q9Y2D0	317 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	DERA	Q9Y315	318 aa		7.65	□□□□□ -1.18
CAST-231	ENST00000510245	SDK2	Q58EX2	2172 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	TARSL2	A2RTX5	802 aa	Known RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	FAM227A	F5H4B4	570 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	PRAMEF26	H0Y7S4	382 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	NTN3	O00634	580 aa	Predicted RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	PMM2	O15305	246 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	HCRT	O43612	131 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	ATP2C2	O75185	946 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	RTN3	O95197	1032 aa	Predicted RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	ZBED1	O96006	694 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	VSIG10L2	P0DP72	767 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	OAS2	P29728	719 aa	Known RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	LHX1	P48742	406 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	WNT3A	P56704	352 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	DUSP2	Q05923	314 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	CALCRL	Q16602	461 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	SPATS1	Q496A3	300 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	KHDC1	Q4VXA5	237 aa	Known RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	SETMAR	Q53H47	684 aa	Predicted RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	PRR30	Q53SZ7	412 aa	Predicted RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	ZNF542P	Q5EBM4	170 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	ZMAT1	Q5H9K5	638 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	TMEM215	Q68D42	235 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	FAM171B	Q6P995	826 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	TTC7B	Q86TV6	843 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	CACNA2D3	Q8IZS8	1091 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	SH2D3C	Q8N5H7	860 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	IL12RB2	Q99665	862 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	MYOC	Q99972	504 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	SYT15	Q9BQS2	421 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	SLC6A15	Q9H2J7	730 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	BHMT2	Q9H2M3	363 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	MANSC1	Q9H8J5	431 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	GPN2	Q9H9Y4	310 aa	Predicted RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	LANCL2	Q9NS86	450 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	CHORDC1	Q9UHD1	332 aa	Predicted RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	RUVBL1	Q9Y265	456 aa	Known RBP	7.64	□□□□□ -1.19
CAST-231	ENST00000510245	DAAM1	Q9Y4D1	1078 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	ACTL7A	Q9Y615	435 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245	CKAP5	Q14008	2032 aa		7.64	□□□□□ -1.19
CAST-231	ENST00000510245		A0A0B4J269	797 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	MATN2	O00339	956 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	OGT	O15294	1046 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	SGTA	O43765	313 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	TLR5	O60602	858 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	MED24	O75448	989 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	SORBS2	O94875	1100 aa	Known RBP	7.63	□□□□□ -1.19
CAST-231	ENST00000510245	RPLP0	P05388	317 aa	Known RBP	7.63	□□□□□ -1.19
CAST-231	ENST00000510245	GOT1	P17174	413 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	ITGA3	P26006	1051 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	SLC8A1	P32418	973 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	PTPN7	P35236	360 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	PSMD8	P48556	350 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	MC1R	Q01726	317 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	NADK2	Q4G0N4	442 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	GALNT17	Q6IS24	598 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	XYLT1	Q86Y38	959 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	MMAA	Q8IVH4	418 aa	Known RBP	7.63	□□□□□ -1.19
CAST-231	ENST00000510245	NUP93	Q8N1F7	819 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	PARD3B	Q8TEW8	1205 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	TTC17	Q96AE7	1141 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	LRRC37B	Q96QE4	947 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	B3GNT4	Q9C0J1	378 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	AKAP7	Q9P0M2	348 aa	Predicted RBP	7.63	□□□□□ -1.19
CAST-231	ENST00000510245	CYTH4	Q9UIA0	394 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	CNOT11	Q9UKZ1	510 aa	Known RBP	7.63	□□□□□ -1.19
CAST-231	ENST00000510245	C2CD2	Q9Y426	696 aa		7.63	□□□□□ -1.19
CAST-231	ENST00000510245	C10orf142	B7Z368	130 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	AQP9	O43315	295 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	CNOT4	O95628	575 aa	Known RBP	7.62	□□□□□ -1.19
CAST-231	ENST00000510245	ADRB2	P07550	413 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	COX6B1	P14854	86 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	DDC	P20711	480 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	CRHR1	P34998	444 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	UGT1A3	P35503	534 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	CHKA	P35790	457 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	LIG4	P49917	911 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	AGFG1	P52594	562 aa	Known RBP	7.62	□□□□□ -1.19
CAST-231	ENST00000510245	HK3	P52790	923 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	MTM1	Q13496	603 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	CNN3	Q15417	329 aa	Known RBP	7.62	□□□□□ -1.19
CAST-231	ENST00000510245	ZRSR2	Q15696	482 aa	Known RBP	7.62	□□□□□ -1.19
CAST-231	ENST00000510245	ANO6	Q4KMQ2	910 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	SNX30	Q5VWJ9	437 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	PIK3AP1	Q6ZUJ8	805 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	CHST9	Q7L1S5	443 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	DAAM2	Q86T65	1068 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	CIR1	Q86X95	450 aa	Predicted RBP	7.62	□□□□□ -1.19
CAST-231	ENST00000510245	SLC35F3	Q8IY50	421 aa		7.62	□□□□□ -1.19
CAST-231	ENST00000510245	WFIKKN2	Q8TEU8	576 aa		7.62	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms