RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 AEBP2Q6ZN18 517 aaPredicted RBP30.68■■■□□ 2.5
CAST-231ENST00000510245 CHIC1Q5VXU3 224 aa29.82■■■□□ 2.36
CAST-231ENST00000510245 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
CAST-231ENST00000510245 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
CAST-231ENST00000510245 FOXD1Q16676 465 aa24.22■■□□□ 1.47
CAST-231ENST00000510245 PLPPR3Q6T4P5 718 aa24.17■■□□□ 1.46
CAST-231ENST00000510245 ADRA2BP18089 450 aa23.2■■□□□ 1.3
CAST-231ENST00000510245 PPP6R1Q9UPN7 881 aa23.19■■□□□ 1.3
CAST-231ENST00000510245 PIAS4Q8N2W9 510 aaPredicted RBP22.85■■□□□ 1.25
CAST-231ENST00000510245 MSH5O43196 834 aa22.4■■□□□ 1.18
CAST-231ENST00000510245 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
CAST-231ENST00000510245 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
CAST-231ENST00000510245 MAPK8IP2Q13387 824 aaPredicted RBP21.1■□□□□ 0.97
CAST-231ENST00000510245 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
CAST-231ENST00000510245 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
CAST-231ENST00000510245 CNKSR2Q8WXI2 1034 aa20.71■□□□□ 0.91
CAST-231ENST00000510245 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
CAST-231ENST00000510245 KCNA4P22459 653 aa20.62■□□□□ 0.89
CAST-231ENST00000510245 NPM3O75607 178 aaKnown RBP20.37■□□□□ 0.85
CAST-231ENST00000510245 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
CAST-231ENST00000510245 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
CAST-231ENST00000510245 DCAF8L1A6NGE4 600 aa20.03■□□□□ 0.8
CAST-231ENST00000510245 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
CAST-231ENST00000510245 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CAST-231ENST00000510245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
CAST-231ENST00000510245 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
CAST-231ENST00000510245 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
CAST-231ENST00000510245 RNF39Q9H2S5 420 aa19.16■□□□□ 0.66
CAST-231ENST00000510245 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
CAST-231ENST00000510245 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
CAST-231ENST00000510245 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
CAST-231ENST00000510245 ZBTB22O15209 634 aa18.94■□□□□ 0.62
CAST-231ENST00000510245 C1QBPQ07021 282 aaKnown RBP18.93■□□□□ 0.62
CAST-231ENST00000510245 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
CAST-231ENST00000510245 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
CAST-231ENST00000510245 ABCC9O60706 1549 aa18.82■□□□□ 0.6
CAST-231ENST00000510245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
CAST-231ENST00000510245 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
CAST-231ENST00000510245 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
CAST-231ENST00000510245 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
CAST-231ENST00000510245 APLP2Q06481 763 aa18.6■□□□□ 0.57
CAST-231ENST00000510245 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
CAST-231ENST00000510245 CAPN15O75808 1086 aa18.55■□□□□ 0.56
CAST-231ENST00000510245 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
CAST-231ENST00000510245 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
CAST-231ENST00000510245 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
CAST-231ENST00000510245 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.52
CAST-231ENST00000510245 DSG3P32926 999 aa18.2■□□□□ 0.5
CAST-231ENST00000510245 ABCB7O75027 752 aa18.18■□□□□ 0.5
CAST-231ENST00000510245 POLA2Q14181 598 aa18.06■□□□□ 0.48
CAST-231ENST00000510245 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
CAST-231ENST00000510245 DNAJC5Q9H3Z4 198 aa17.73■□□□□ 0.43
CAST-231ENST00000510245 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
CAST-231ENST00000510245 FBLN2P98095 1184 aa17.63■□□□□ 0.41
CAST-231ENST00000510245 MKRN4PQ13434 485 aaPredicted RBP17.52■□□□□ 0.4
CAST-231ENST00000510245 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
CAST-231ENST00000510245 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
CAST-231ENST00000510245 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
CAST-231ENST00000510245 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
CAST-231ENST00000510245 SPDYE2BA6NHP3 402 aa17.21■□□□□ 0.35
CAST-231ENST00000510245 SPDYE6P0CI01 402 aa17.21■□□□□ 0.35
CAST-231ENST00000510245 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
CAST-231ENST00000510245 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
CAST-231ENST00000510245 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
CAST-231ENST00000510245 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
CAST-231ENST00000510245 NACADO15069 1562 aa17.06■□□□□ 0.32
CAST-231ENST00000510245 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
CAST-231ENST00000510245 SSUH2Q9Y2M2 353 aa17.03■□□□□ 0.32
CAST-231ENST00000510245 FKBP8Q14318 412 aa17■□□□□ 0.31
CAST-231ENST00000510245 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
CAST-231ENST00000510245 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
CAST-231ENST00000510245 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
CAST-231ENST00000510245 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
CAST-231ENST00000510245 DCAF8L2P0C7V8 631 aa16.87■□□□□ 0.29
CAST-231ENST00000510245 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
CAST-231ENST00000510245 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
CAST-231ENST00000510245 PITPNM1O00562 1244 aa16.76■□□□□ 0.27
CAST-231ENST00000510245 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
CAST-231ENST00000510245 PROM2Q8N271 834 aa16.68■□□□□ 0.26
CAST-231ENST00000510245 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
CAST-231ENST00000510245 CUX2O14529 1486 aa16.63■□□□□ 0.25
CAST-231ENST00000510245 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
CAST-231ENST00000510245 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
CAST-231ENST00000510245 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
CAST-231ENST00000510245 PRR29P0C7W0 189 aa16.57■□□□□ 0.24
CAST-231ENST00000510245 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
CAST-231ENST00000510245 PIP4P2Q8N4L2 257 aa16.46■□□□□ 0.23
CAST-231ENST00000510245 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
CAST-231ENST00000510245 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
CAST-231ENST00000510245 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
CAST-231ENST00000510245 PRKAR2AP13861 404 aaKnown RBP16.37■□□□□ 0.21
CAST-231ENST00000510245 POTEHQ6S545 545 aa16.36■□□□□ 0.21
CAST-231ENST00000510245 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
CAST-231ENST00000510245 MIER1Q8N108 512 aa16.28■□□□□ 0.2
CAST-231ENST00000510245 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
CAST-231ENST00000510245 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
CAST-231ENST00000510245 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
CAST-231ENST00000510245 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
CAST-231ENST00000510245 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
CAST-231ENST00000510245 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms