RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DUX1O43812 170 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 KRT1P04264 644 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 POLD2P49005 469 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 CLCNKAP51800 687 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 LIMK2P53671 638 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 HADHBP55084 474 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 OR1D5P58170 312 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 KIR2DS5Q14953 304 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 AMZ1Q400G9 498 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 ZDHHC20Q5W0Z9 365 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 SLC9B2Q86UD5 537 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 RFX6Q8HWS3 928 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 SFRP1Q8N474 314 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 ZSCAN1Q8NBB4 408 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 IMP4Q96G21 291 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 AHCYL2Q96HN2 611 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 OLFM3Q96PB7 478 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 VAT1Q99536 393 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 SARS2Q9NP81 518 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 ZNHIT2Q9UHR6 403 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 TMEM98Q9Y2Y6 226 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 BAHCC1Q9P281 2608 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 ITPR1Q14643 2758 aa14.31□□□□□ -0.12
HMGCS1-203ENST00000507004 IGHV1OR21-1A0A087WYE8 117 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 INPP4BO15327 924 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 DNAJC6O75061 913 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 MMP2P08253 660 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 CD1CP29017 333 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 CSTF2P33240 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 ATP1A2P50993 1020 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 EPHA4P54764 986 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 RAB15P59190 212 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 CDK18Q07002 472 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TEX44Q53QW1 395 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 ZNF569Q5MCW4 686 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 MANEAQ5SRI9 462 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TMEM71Q6P5X7 295 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 LYSMD3Q7Z3D4 306 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TRAM1L1Q8N609 369 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 CNTD1Q8N815 330 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TEFMQ96QE5 360 aaKnown RBP14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TAAR9Q96RI9 348 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 CHP1Q99653 195 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 ASPSCR1Q9BZE9 553 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TRABDQ9H4I3 376 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 TRIM39Q9HCM9 518 aa14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.123e-10■■□□□ 12.8
HMGCS1-203ENST00000507004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
HMGCS1-203ENST00000507004 A0A0A6YYK5 440 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 IGHV5-10-1A0A0J9YXX1 117 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 C3orf70A6NLC5 250 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 B4E171 279 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 STMND1H3BQB6 276 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 PPM1DO15297 605 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 GRID2O43424 1007 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 NUAK1O60285 661 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 ZNF189O75820 626 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 NDST3O95803 873 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 EPOP01588 193 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 ITGB2P05107 769 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 SFTPCP11686 197 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 HGFP14210 728 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 TSPAN7P41732 249 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 MAPK10P53779 464 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 HHEXQ03014 270 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 IHHQ14623 411 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 PTPRRQ15256 657 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 RFLNAQ6ZTI6 216 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 USP53Q70EK8 1073 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 MARK2Q7KZI7 788 aaKnown RBP14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 TMC3Q7Z5M5 1100 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 CPNE8Q86YQ8 564 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 DTX3LQ8TDB6 740 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 SLC37A2Q8TED4 501 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 TFB1MQ8WVM0 346 aaKnown RBP14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 TTC9Q92623 222 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 USP7Q93009 1102 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 TADA1Q96BN2 335 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 TRIB3Q96RU7 358 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 AGAP2Q99490 1192 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 NUDT22Q9BRQ3 303 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 DDA1Q9BW61 102 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 GPR63Q9BZJ6 419 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 ZMYND15Q9H091 742 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 SEMA6CQ9H3T2 930 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 RDH14Q9HBH5 336 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 SPTLC3Q9NUV7 552 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 HACD3Q9P035 362 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 PDP2Q9P2J9 529 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 CNOT6Q9ULM6 557 aaKnown RBP14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 COL6A6A6NMZ7 2263 aa14.29□□□□□ -0.12
HMGCS1-203ENST00000507004 PRAMEF33A0A0G2JMD5 474 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 PMS2P1A4D2B8 440 aa14.28□□□□□ -0.12
HMGCS1-203ENST00000507004 CASC3O15234 703 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms