RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GLT1D1Q96MS3 346 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 BIRC8Q96P09 236 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SLC29A1Q99808 456 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 CIB1Q99828 191 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SH3GL3Q99963 347 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 TDRD1Q9BXT4 1180 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 GRIP2Q9C0E4 1043 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 NOL11Q9H8H0 719 aaKnown RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SYTL2Q9HCH5 934 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 SDR39U1Q9NRG7 319 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-204ENST00000501271 ABCD2Q9UBJ2 740 aa9.81□□□□□ -0.84
CLIP1-204ENST00000501271 A0A0U1RQS6 177 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NCF1BA6NI72 391 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NCF1CA8MVU1 366 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 ADAM12O43184 909 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 OR1I1O60431 355 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 TIPRLO75663 272 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NCF1P14598 390 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 LBPP18428 481 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 RPL5P46777 297 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 AGTR2P50052 363 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 KPNA1P52294 538 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 DIO3P55073 304 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 CDH4P55283 916 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 OXCT1P55809 520 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 RAD51Q06609 339 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 APOFQ13790 326 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 PTPRRQ15256 657 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 TAF1AQ15573 450 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 PTPRNQ16849 979 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 MAP7D1Q3KQU3 841 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NADK2Q4G0N4 442 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 DENND1CQ8IV53 801 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 SLC15A3Q8IY34 581 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 LPCAT1Q8NF37 534 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 OR2T34Q8NGX1 318 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 OR2T3Q8NH03 318 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 BCL7CQ8WUZ0 217 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 CANT1Q8WVQ1 401 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 PBXIP1Q96AQ6 731 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 MRPS26Q9BYN8 205 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 TRIM8Q9BZR9 551 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 CCDC68Q9H2F9 335 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 SLC52A3Q9NQ40 469 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 DNMT3LQ9UJW3 386 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 RNF11Q9Y3C5 154 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 TIMM22Q9Y584 194 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 OAS3Q9Y6K5 1087 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 SLC4A7Q9Y6M7 1214 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 COMMD3-BMI1R4GMX3 469 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 PLXNA4Q9HCM2 1894 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 ZFC3H1O60293 1989 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 BTN3A1O00481 513 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 KIF3CO14782 793 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 ANGPT2O15123 496 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 KDELR3O43731 214 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NBNO60934 754 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NIPSNAP2O75323 286 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NDUFS3O75489 264 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 MATN4O95460 622 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 TSPAN12O95859 305 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 ATP5C1P36542 298 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 APLP1P51693 650 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 CREB5Q02930 508 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 USP41Q3LFD5 358 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 UGT3A1Q6NUS8 523 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 RBM44Q6ZP01 1051 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 SYVN1Q86TM6 617 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 SIDT2Q8NBJ9 832 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 CYP2S1Q96SQ9 504 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 TTLL2Q9BWV7 592 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 COMMD8Q9NX08 183 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 CMTM6Q9NX76 183 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 PLK2Q9NYY3 685 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 EGFL7Q9UHF1 273 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 FKBPLQ9UIM3 349 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 ZNF225Q9UK10 706 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 FNDC3AQ9Y2H6 1198 aaKnown RBP9.8□□□□□ -0.84
CLIP1-204ENST00000501271 NDUFAF1Q9Y375 327 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 ASB1Q9Y576 335 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 PCDHGC4Q9Y5F7 938 aa9.8□□□□□ -0.84
CLIP1-204ENST00000501271 H0YJX3 145 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 CBX4O00257 560 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 ENPP3O14638 875 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 VILLO15195 856 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 GPR39O43194 453 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 KLKB1P03952 638 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 ALDH2P05091 517 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 CKMT2P17540 419 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 PSMC3P17980 439 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 SLC6A2P23975 617 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 SLC11A2P49281 568 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 ATP6V0D1P61421 351 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 GPNMBQ14956 572 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 CYTH1Q15438 398 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 SLC5A9Q2M3M2 681 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 CTSL3PQ5NE16 218 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 ANKS6Q68DC2 871 aa9.79□□□□□ -0.84
CLIP1-204ENST00000501271 LRRC8DQ7L1W4 858 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms