RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 GALNT13Q8IUC8 556 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 REXO1L1PQ8IX06 675 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 TTC30BQ8N4P2 665 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 OR6C4Q8NGE1 309 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 MAPK15Q8TD08 544 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 NAT6Q93015 286 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-213ENST00000498495 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 OR2M4Q96R27 311 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 TBL1YQ9BQ87 522 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 RMI1Q9H9A7 625 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 TRIM39Q9HCM9 518 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 TRMT1Q9NXH9 659 aaKnown RBP12.7□□□□□ -0.38
HSPG2-213ENST00000498495 IL17CQ9P0M4 197 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 VPS18Q9P253 973 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-213ENST00000498495 FEZ2Q9UHY8 353 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-213ENST00000498495 JRKLQ9Y4A0 524 aa12.7□□□□□ -0.38
HSPG2-213ENST00000498495 C1QTNF9BB2RNN3 333 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 BUD23O43709 281 aaKnown RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 OPA1O60313 960 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 USP12O75317 370 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 FGGP02679 453 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 LPOP22079 712 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 AK4P27144 223 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 SPAM1P38567 509 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 CLDN6P56747 220 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 CTBSQ01459 385 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 TARDBPQ13148 414 aaKnown RBP eCLIP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 TAF1AQ15573 450 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 OASLQ15646 514 aaKnown RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 SLC30A9Q6PML9 568 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 NRROSQ86YC3 692 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 MARCH9Q86YJ5 346 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 TAB3Q8N5C8 712 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 PDCD7Q8N8D1 485 aaKnown RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 GPR156Q8NFN8 814 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 BRSK1Q8TDC3 778 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 GLYATL1Q969I3 302 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 LRRC40Q9H9A6 602 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 ARFGAP3Q9NP61 516 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 SPATS2LQ9NUQ6 558 aaKnown RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 TAAR2Q9P1P5 351 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 ATXN10Q9UBB4 475 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 CLCA2Q9UQC9 943 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 DRG1Q9Y295 367 aaKnown RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 PLEKHM1Q9Y4G2 1056 aa12.69□□□□□ -0.38
HSPG2-213ENST00000498495 OAS3Q9Y6K5 1087 aaKnown RBP12.69□□□□□ -0.38
HSPG2-213ENST00000498495 B4DGG1 531 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 GRID2O43424 1007 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 NUAK1O60285 661 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 DNAJC6O75061 913 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 CRTAMO95727 393 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 MT-CO3P00414 261 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 MSNP26038 577 aaKnown RBP12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ACTR1BP42025 376 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 LMAN1P49257 510 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ACTR1AP61163 376 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 PDE1BQ01064 536 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 LRP8Q14114 963 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ATP13A5Q4VNC0 1218 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 PERM1Q5SV97 790 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ZNF648Q5T619 568 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-213ENST00000498495 KCTD11Q693B1 232 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-213ENST00000498495 KLHDC8BQ8IXV7 354 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 CACTIN-AS1Q8N1I8 211 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 CCDC89Q8N998 374 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 KYQ8NBH2 561 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 GDAP1Q8TB36 358 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 DTX3LQ8TDB6 740 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ZDHHC1Q8WTX9 485 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 GATA6Q92908 595 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 RTP4Q96DX8 246 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 PBKQ96KB5 322 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 TTC25Q96NG3 672 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 CCDC3Q9BQI4 270 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ARNT2Q9HBZ2 717 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 PRKAB1Q9Y478 270 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 ARL5AQ9Y689 179 aa12.68□□□□□ -0.38
HSPG2-213ENST00000498495 GLYATL1P3A0A0U1RQE8 302 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 TRABD2BA6NFA1 517 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 GPR89AB7ZAQ6 455 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 E7EVH7 732 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 KIF5CO60282 957 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 NOBOXO60393 691 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 UGT1A9O60656 530 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 CDK14O94921 469 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 AP2A1O95782 977 aa12.67□□□□□ -0.38
HSPG2-213ENST00000498495 PROS1P07225 676 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 188.2 ms