RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZNF765Q7L2R6 523 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 ATPAF2Q8N5M1 289 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 HSPH1Q92598 858 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 CSPG4P5Q96PW8 444 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 ZPBPQ9BS86 351 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 EFHD1Q9BUP0 239 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 TBC1D10AQ9BXI6 508 aa15.92■□□□□ 0.14
MUC1-220ENST00000498431 SIDT1Q9NXL6 827 aaKnown RBP15.92■□□□□ 0.14
MUC1-220ENST00000498431 CNOT6Q9ULM6 557 aaKnown RBP15.92■□□□□ 0.14
MUC1-220ENST00000498431 UNC79Q9P2D8 2635 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 A0A0J9YYE9 177 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 BLACEA4D250 179 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 POLR1CO15160 346 aaPredicted RBP15.91■□□□□ 0.14
MUC1-220ENST00000498431 TRBC1P01850 177 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 FURINP09958 794 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 ZNF28P17035 718 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 GFERP55789 205 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 RALGPS1Q5JS13 557 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 BBS5Q8N3I7 341 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.91■□□□□ 0.14
MUC1-220ENST00000498431 EXD1Q8NHP7 514 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 WDR24Q96S15 920 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 CNOT8Q9UFF9 292 aaKnown RBP15.91■□□□□ 0.14
MUC1-220ENST00000498431 KCNMB2Q9Y691 235 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 RPS6KL1Q9Y6S9 549 aa15.91■□□□□ 0.14
MUC1-220ENST00000498431 PRRC2CQ9Y520 2896 aaKnown RBP15.91■□□□□ 0.14
MUC1-220ENST00000498431 ZNF106Q9H2Y7 1883 aaKnown RBP15.91■□□□□ 0.14
MUC1-220ENST00000498431 SPTBN1Q01082 2364 aaKnown RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 SNX2O60749 519 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 CLDN7O95471 211 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 FTLP02792 175 aaPredicted RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 ATP1A3P13637 1013 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 ACP5P13686 325 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 ZNF30P17039 623 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 MAN1A1P33908 653 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 ARL4AP40617 200 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 MLLT10P55197 1068 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 CDH6P55285 790 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 MC1RQ01726 317 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 KLRB1Q12918 225 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 CRTC2Q53ET0 693 aaPredicted RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 E4F1Q66K89 784 aaPredicted RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 NLRP8Q86W28 1048 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 TEX26Q8N6G2 289 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 ZNF653Q96CK0 615 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 HSD3B7Q9H2F3 369 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 TRIT1Q9H3H1 467 aaKnown RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.9■□□□□ 0.14
MUC1-220ENST00000498431 OGFRQ9NZT2 677 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 VPS18Q9P253 973 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 CHKBQ9Y259 395 aa15.9■□□□□ 0.14
MUC1-220ENST00000498431 MN1Q10571 1320 aaPredicted RBP15.9■□□□□ 0.14
MUC1-220ENST00000498431 NOTCH2Q04721 2471 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 LRRC10BA6NIK2 292 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 FADS2P1A8MWK0 482 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 PRLP01236 227 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 CCDC172P0C7W6 258 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 RARAP10276 462 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 PCK1P35558 622 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 CD97P48960 835 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 EPHA4P54764 986 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 DSC2Q02487 901 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 ITKQ08881 620 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 SEPT6Q14141 434 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 ZNF571Q7Z3V5 609 aaPredicted RBP15.89■□□□□ 0.13
MUC1-220ENST00000498431 TMEM135Q86UB9 458 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 SLC9B2Q86UD5 537 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 ESX1Q8N693 406 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 NSMCE1Q8WV22 266 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 ULBP3Q9BZM4 244 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 PCDH18Q9HCL0 1135 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 PRDM8Q9NQV8 689 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 MYO1AQ9UBC5 1043 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 CPNE7Q9UBL6 633 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 CROTQ9UKG9 612 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 ICE1Q9Y2F5 2266 aa15.89■□□□□ 0.13
MUC1-220ENST00000498431 LRRC53A6NM62 1247 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 DDX3XO00571 662 aaKnown RBP eCLIP15.88■□□□□ 0.13
MUC1-220ENST00000498431 PYGLP06737 847 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 KRT7P08729 469 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 F3P13726 295 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 DLSTP36957 453 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 EPHB1P54762 984 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 SH3BP2P78314 561 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 FOXM1Q08050 763 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 MAP7Q14244 749 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 ERV3-1Q14264 604 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 C4orf17Q53FE4 359 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 PPP1R2P3Q6NXS1 205 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 LYSMD3Q7Z3D4 306 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 NDUFAF2Q8N183 169 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 GALNT6Q8NCL4 622 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 ANKRD20A12PQ8NF67 263 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 SH3KBP1Q96B97 665 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 HERPUD2Q9BSE4 406 aa15.88■□□□□ 0.13
MUC1-220ENST00000498431 STN1Q9H668 368 aaKnown RBP15.88■□□□□ 0.13
MUC1-220ENST00000498431 HAUS4Q9H6D7 363 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms