RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ITGA2P17301 1181 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP3A5P20815 502 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PCMT1P22061 227 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 DNAJB1P25685 340 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 UQCRC1P31930 480 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 EVI2BP34910 448 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 KRT20P35900 424 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGEA6P43360 314 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ABCG1P45844 678 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 RPS5P46782 204 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GNPDA1P46926 289 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 NPTX2P47972 431 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 OLR1P78380 273 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GCNT1Q02742 428 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TAP1Q03518 808 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PRKAA1Q13131 559 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 IKZF1Q13422 519 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 NFIXQ14938 502 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 MFSD13AQ14CX5 517 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ACAP2Q15057 778 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PPP1R3AQ16821 1122 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GEN1Q17RS7 908 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TBRG1Q3YBR2 411 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF404Q494X3 552 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 SPATS1Q496A3 300 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 DALRD3Q5D0E6 543 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 KCNT1Q5JUK3 1230 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM236Q5W0B7 351 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TTC23Q5W5X9 447 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 NIPA1Q7RTP0 329 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 RAB43Q86YS6 212 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 NPAS3Q8IXF0 933 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TBC1D21Q8IYX1 336 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 C8orf59Q8N0T1 100 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TAB3Q8N5C8 712 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ZSCAN1Q8NBB4 408 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TP53I13Q8NBR0 393 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PAPD5Q8NDF8 572 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 BLOC1S5Q8TDH9 187 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC22A17Q8WUG5 538 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 DEDD2Q8WXF8 326 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 IRF7Q92985 503 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 CIDECQ96AQ7 238 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 YIPF6Q96EC8 236 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 AURKBQ96GD4 344 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 CCDC120Q96HB5 630 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ELMO2Q96JJ3 720 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF300Q96RE9 604 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 NODALQ96S42 347 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TTYH2Q9BSA4 534 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TRAF4Q9BUZ4 470 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 NT5C1AQ9BXI3 368 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ALOXE3Q9BYJ1 711 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 REXO4Q9GZR2 422 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 VPS33BQ9H267 617 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 EPS8L2Q9H6S3 715 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 RSAD1Q9HA92 442 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GPRC5CQ9NQ84 441 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 XPNPEP3Q9NQH7 507 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ZC4H2Q9NQZ6 224 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TLR9Q9NR96 1032 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 FBXL12Q9NXK8 326 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 CACNA2D2Q9NY47 1150 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 MRPL39Q9NYK5 338 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TAS2R7Q9NYW3 318 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PAK5Q9P286 719 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 MKLN1Q9UL63 735 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 DIMT1Q9UNQ2 313 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 AGTPBP1Q9UPW5 1226 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDHB5Q9Y5E4 795 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDHA11Q9Y5I1 949 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 COPG1Q9Y678 874 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 CSNK1G3Q9Y6M4 447 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 THSD7AQ9UPZ6 1657 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CACNA1SQ13698 1873 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PNMA8CA0A1B0GUJ8 204 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM149AA5PLN7 773 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CCDC154A6NI56 674 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KCNU1A8MYU2 1149 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 LOC110117498-PIK3R3F6TDL0 507 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 F8VP50 259 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 G3V2L1 256 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PDHXO00330 501 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PIK3R2O00459 728 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NEMP1O14524 444 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TPP1O14773 563 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PLD2O14939 933 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ANGPT2O15123 496 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ATG13O75143 517 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SRP72O76094 671 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 INMTO95050 263 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PAHP00439 452 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 LDLRP01130 860 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 S100A6P06703 90 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SNRPB2P08579 225 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KRT19P08727 400 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KRT7P08729 469 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HTR1AP08908 422 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TGFB3P10600 412 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MAPTP10636 758 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms