RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 GPBAR1Q8TDU6 330 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 DEPDC7Q96QD5 511 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 TBL1YQ9BQ87 522 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 CCDC3Q9BQI4 270 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 GORASP1Q9BQQ3 440 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 TMEM121BQ9BXQ6 578 aaPredicted RBP18.74■□□□□ 0.59
CHKB-204ENST00000465842 FRMD8P1Q9BZ68 369 aaPredicted RBP18.74■□□□□ 0.59
CHKB-204ENST00000465842 TAAR2Q9P1P5 351 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 VPS18Q9P253 973 aa18.74■□□□□ 0.59
CHKB-204ENST00000465842 NFKBIL1Q9UBC1 381 aaPredicted RBP18.74■□□□□ 0.59
CHKB-204ENST00000465842 CNOT6Q9ULM6 557 aaKnown RBP18.74■□□□□ 0.59
CHKB-204ENST00000465842 OAS3Q9Y6K5 1087 aaKnown RBP18.74■□□□□ 0.59
CHKB-204ENST00000465842 ARID1BQ8NFD5 2236 aaPredicted RBP18.73■□□□□ 0.59
CHKB-204ENST00000465842 BUD23O43709 281 aaKnown RBP18.73■□□□□ 0.59
CHKB-204ENST00000465842 HMGCLP35914 325 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 PARP6Q2NL67 630 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 P3H1Q32P28 736 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 PYCR3Q53H96 274 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 ZDHHC20Q5W0Z9 365 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 TTC30BQ8N4P2 665 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 TAB3Q8N5C8 712 aaPredicted RBP18.73■□□□□ 0.59
CHKB-204ENST00000465842 OR6C4Q8NGE1 309 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 GDAP1Q8TB36 358 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 ZDHHC1Q8WTX9 485 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 C1orf54Q8WWF1 131 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 GLYATL1Q969I3 302 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 CCDC74AQ96AQ1 378 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 SCARF2Q96GP6 870 aaPredicted RBP18.73■□□□□ 0.59
CHKB-204ENST00000465842 PLEKHG4BQ96PX9 1271 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 CCDC86Q9H6F5 360 aaKnown RBP18.73■□□□□ 0.59
CHKB-204ENST00000465842 ARFGAP3Q9NP61 516 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 ZNF148Q9UQR1 794 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 PRKAB1Q9Y478 270 aa18.73■□□□□ 0.59
CHKB-204ENST00000465842 TRABD2BA6NFA1 517 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 STX7O15400 261 aaKnown RBP18.72■□□□□ 0.59
CHKB-204ENST00000465842 LIASO43766 372 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 USP12O75317 370 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 ACTN2P35609 894 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 SPAM1P38567 509 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 GDF10P55107 478 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 OLIG2Q13516 323 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 SNX1Q13596 522 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 SPARCL1Q14515 664 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 C14orf28Q4W4Y0 310 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 CHST15Q7LFX5 561 aaPredicted RBP18.72■□□□□ 0.59
CHKB-204ENST00000465842 NRROSQ86YC3 692 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 GPR156Q8NFN8 814 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 NXPE2Q96DL1 559 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 OR2AG1Q9H205 316 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 RMI1Q9H9A7 625 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 SPATS2LQ9NUQ6 558 aaKnown RBP18.72■□□□□ 0.59
CHKB-204ENST00000465842 PLEKHM1Q9Y4G2 1056 aa18.72■□□□□ 0.59
CHKB-204ENST00000465842 C2orf81A6NN90 581 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 NOBOXO60393 691 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 CSO75390 466 aaKnown RBP18.71■□□□□ 0.59
CHKB-204ENST00000465842 IFNB1P01574 187 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 ADRA1AP35348 466 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 LRP8Q14114 963 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 ZNF648Q5T619 568 aaPredicted RBP18.71■□□□□ 0.59
CHKB-204ENST00000465842 OGFOD3Q6PK18 319 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 FAM151BQ6UXP7 276 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 RANBP10Q6VN20 620 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 DCBLD1Q8N8Z6 715 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 Q8N9G6 341 aaPredicted RBP18.71■□□□□ 0.59
CHKB-204ENST00000465842 WDR48Q8TAF3 677 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 MAIP1Q8WWC4 291 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 LRRC40Q9H9A6 602 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 TRIM39Q9HCM9 518 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHKB-204ENST00000465842 IL17CQ9P0M4 197 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 ATXN10Q9UBB4 475 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 AK5Q9Y6K8 562 aa18.71■□□□□ 0.59
CHKB-204ENST00000465842 GLYATL1P3A0A0U1RQE8 302 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 PSMD3O43242 534 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 GRID2O43424 1007 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 CEP104O60308 925 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 DNAJC6O75061 913 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 PPFIA2O75334 1257 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 METTL18O95568 372 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 CRTAMO95727 393 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 ACP5P13686 325 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 GLB1P16278 677 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 LPOP22079 712 aaPredicted RBP18.7■□□□□ 0.58
CHKB-204ENST00000465842 STIP1P31948 543 aaKnown RBP18.7■□□□□ 0.58
CHKB-204ENST00000465842 LMAN1P49257 510 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 MAZP56270 477 aaKnown RBP18.7■□□□□ 0.58
CHKB-204ENST00000465842 GTF2H3Q13889 308 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 SPIDRQ14159 915 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 TAF1AQ15573 450 aaPredicted RBP18.7■□□□□ 0.58
CHKB-204ENST00000465842 CERCAMQ5T4B2 595 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 CDCP2Q5VXM1 449 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 CRTC3Q6UUV7 619 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 RBM44Q6ZP01 1051 aaKnown RBP18.7■□□□□ 0.58
CHKB-204ENST00000465842 SFTPA2Q8IWL1 248 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 CACTIN-AS1Q8N1I8 211 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 CCDC89Q8N998 374 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 KDF1Q8NAX2 398 aaPredicted RBP18.7■□□□□ 0.58
CHKB-204ENST00000465842 MDM1Q8TC05 714 aa18.7■□□□□ 0.58
CHKB-204ENST00000465842 TLR10Q9BXR5 811 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms