RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 SRCP12931 536 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 PORP16435 677 aaPredicted RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 UBA1P22314 1058 aaKnown RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 BDNFP23560 247 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 GCH1P30793 250 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 PRCPP42785 496 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 CLNS1AP54105 237 aaKnown RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 PSMC6P62333 389 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 TUBA1BP68363 451 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 MRPS34P82930 218 aaKnown RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 FOXM1Q08050 763 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 ZNF155Q12901 538 aaPredicted RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 TRAF2Q12933 501 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 PRKG2Q13237 762 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 WTAPQ15007 396 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 CALCRLQ16602 461 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 PNLIPRP3Q17RR3 467 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 ZNF805Q5CZA5 627 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 RILPL1Q5EBL4 403 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 NRROSQ86YC3 692 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 ADHFE1Q8IWW8 467 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 ODF3L1Q8IXM7 274 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 RNF168Q8IYW5 571 aaPredicted RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 OR1J2Q8NGS2 313 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 WFIKKN2Q8TEU8 576 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 TANKQ92844 425 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 NSUN4Q96CB9 384 aaKnown RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 THOC3Q96J01 351 aaKnown RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 ADGRG7Q96K78 797 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 SMC6Q96SB8 1091 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 NCAPGQ9BPX3 1015 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 GAREM1Q9H706 876 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 PAG1Q9NWQ8 432 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 OGFRQ9NZT2 677 aa4.04□□□□□ -1.76
PTPN12-210ENST00000464313 RSF1Q96T23 1441 aaPredicted RBP4.04□□□□□ -1.76
PTPN12-210ENST00000464313 A0A1W2PQ09 198 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 OGG1O15527 345 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 SPINT2O43291 252 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 PLPP2O43688 288 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 SLC28A2O43868 658 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 RFPL2O75678 378 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GAGE7O76087 117 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 PMS2P2O95744 297 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 LDHCP07864 332 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 RRM1P23921 792 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 PON1P27169 355 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 ACADLP28330 430 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 CORO1AP31146 461 aaKnown RBP4.03□□□□□ -1.76
PTPN12-210ENST00000464313 ACSL1P33121 698 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 CLCNKAP51800 687 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 CLDN20P56880 219 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 TAS2R38P59533 333 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 ZBED6P86452 979 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 KIF5AQ12840 1032 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 DLG1Q12959 904 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GRIK2Q13002 908 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GAGE1Q13065 139 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 GAGE4Q13068 117 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 CUL4AQ13619 759 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 SF3B4Q15427 424 aaKnown RBP eCLIP4.03□□□□□ -1.763e-13■■■■■ 26.9
PTPN12-210ENST00000464313 PCGF3Q3KNV8 242 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 DCST1Q5T197 706 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 NSUN5P2Q63ZY6 315 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 FRG2Q64ET8 278 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 CCNI2Q6ZMN8 369 aaPredicted RBP4.03□□□□□ -1.76
PTPN12-210ENST00000464313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTPN12-210ENST00000464313 LILRB1Q8NHL6 650 aaPredicted RBP4.03□□□□□ -1.76
PTPN12-210ENST00000464313 HM13Q8TCT9 377 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 NUDCD2Q8WVJ2 157 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 PGAM5Q96HS1 289 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 MTERF1Q99551 399 aaKnown RBP4.03□□□□□ -1.76
PTPN12-210ENST00000464313 MAK16Q9BXY0 300 aaKnown RBP4.03□□□□□ -1.76
PTPN12-210ENST00000464313 TM6SF1Q9BZW5 370 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 STK39Q9UEW8 545 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 SIX4Q9UIU6 781 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 FBXW11Q9UKB1 542 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 ACSL5Q9ULC5 683 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 KLHL20Q9Y2M5 609 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 LOXL2Q9Y4K0 774 aa4.03□□□□□ -1.76
PTPN12-210ENST00000464313 PDS5AQ29RF7 1337 aaKnown RBP4.02□□□□□ -1.77
PTPN12-210ENST00000464313 ARHGEF40Q8TER5 1519 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 A0A1W2PR77 199 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 PPP1R3DO95685 299 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 CSH1P0DML2 217 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 CSH2P0DML3 217 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 TMEM11P17152 192 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 APOBEC1P41238 236 aaKnown RBP4.02□□□□□ -1.77
PTPN12-210ENST00000464313 MSH2P43246 934 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 PEX5P50542 639 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 SEC61A1P61619 476 aaKnown RBP4.02□□□□□ -1.77
PTPN12-210ENST00000464313 TFAP4Q01664 338 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 SLC20A2Q08357 652 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 SREBF2Q12772 1141 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 CHAF1BQ13112 559 aa4.02□□□□□ -1.77
PTPN12-210ENST00000464313 MAD2L1Q13257 205 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms