RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 VPS4BO75351 444 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 RFPL1O75677 317 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 FURINP09958 794 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 SLC2A4P14672 509 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 ZNF30P17039 623 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 CTPS1P17812 591 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 DLSTP36957 453 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 UQCRFS1P47985 274 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 MAXP61244 160 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 PTSQ03393 145 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 MAMLD1Q13495 774 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 KRT31Q15323 416 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 FKBP15Q5T1M5 1219 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 ARMC12Q5T9G4 340 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 FHL5Q5TD97 284 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 LRRC66Q68CR7 880 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 ACAD10Q6JQN1 1059 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 C6orf15Q6UXA7 325 aaPredicted RBP10.75□□□□□ -0.69
CBX3-205ENST00000462165 CYP4V2Q6ZWL3 525 aaPredicted RBP10.75□□□□□ -0.69
CBX3-205ENST00000462165 CHST15Q7LFX5 561 aaPredicted RBP10.75□□□□□ -0.69
CBX3-205ENST00000462165 PLXDC1Q8IUK5 500 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 NDUFAF2Q8N183 169 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 BBS5Q8N3I7 341 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 GALNT11Q8NCW6 608 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 EXD1Q8NHP7 514 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 SCAMP4Q969E2 229 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 AGAP2Q99490 1192 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 HERPUD2Q9BSE4 406 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 TBC1D10AQ9BXI6 508 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 ULBP3Q9BZM4 244 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 PARVAQ9NVD7 372 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 VPS18Q9P253 973 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 CNOT8Q9UFF9 292 aaKnown RBP10.75□□□□□ -0.69
CBX3-205ENST00000462165 TBC1D29Q9UFV1 150 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 KLHL3Q9UH77 587 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 PCSK1NQ9UHG2 260 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 ZNHIT2Q9UHR6 403 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 CROTQ9UKG9 612 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 VPS4AQ9UN37 437 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 CACNA1DQ01668 2161 aa10.75□□□□□ -0.69
CBX3-205ENST00000462165 KIR2DS5A0A0G2JLQ3 304 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 A0A0G2JNG1 304 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 A0A0J9YYE9 177 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 LILRA5A6NI73 299 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 OR5K4A6NMS3 321 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 KIR2DS3K7RE56 304 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 INPP4BO15327 924 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 PRPSAP2O60256 369 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 MAFKO60675 156 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 RNF8O76064 485 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 AGFG2O95081 481 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 ASMTLO95671 621 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 RECKO95980 971 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 TRBC1P01850 177 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 C9P02748 559 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 TPM2P07951 284 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 PDHA1P08559 390 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 F3P13726 295 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 ZNF28P17035 718 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 GNLYP22749 145 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 MIPP30301 263 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 MAPK9P45984 424 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 PMS2P54278 862 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 FOXM1Q08050 763 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 ERV3-1Q14264 604 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 ESPL1Q14674 2120 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 KIR2DS5Q14953 304 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 CDKAL1Q5VV42 579 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 PLEKHA7Q6IQ23 1121 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 LYSMD3Q7Z3D4 306 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 RAVER1Q8IY67 606 aaKnown RBP10.74□□□□□ -0.69
CBX3-205ENST00000462165 AVL9Q8NBF6 648 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 SSC4DQ8WTU2 575 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
CBX3-205ENST00000462165 C9orf72Q96LT7 481 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 CLSTN2Q9H4D0 955 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 RMI1Q9H9A7 625 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 KCND3Q9UK17 655 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 TLK1Q9UKI8 766 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 PCDHGA6Q9Y5G7 932 aa10.74□□□□□ -0.69
CBX3-205ENST00000462165 RP1L1Q8IWN7 2480 aaPredicted RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 TOX3O15405 576 aaPredicted RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 LRCH4O75427 683 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 PDGFAP04085 211 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 ATP1A1P05023 1023 aaKnown RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 ATP1A3P13637 1013 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 MMP13P45452 471 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 CLCNKAP51800 687 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 STC1P52823 247 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 CDH6P55285 790 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 GFERP55789 205 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 MARC1Q5VT66 337 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 PPP1R2P3Q6NXS1 205 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 APLFQ8IW19 511 aaPredicted RBP10.73□□□□□ -0.69
CBX3-205ENST00000462165 EFCAB3Q8N7B9 438 aa10.73□□□□□ -0.69
CBX3-205ENST00000462165 GALNT6Q8NCL4 622 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms