RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RPL17P18621 184 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 MLLT10P55197 1068 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 TBX4P57082 545 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 RAB10P61026 200 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 VBP1P61758 197 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 PURAQ00577 322 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 UBE3AQ05086 875 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 GTF2H3Q13889 308 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 GRB7Q14451 532 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CTXN3Q4LDR2 81 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 TAS2R42Q7RTR8 314 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 LYSMD3Q7Z3D4 306 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZC3HC1Q86WB0 502 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 LGI2Q8N0V4 545 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 C7orf57Q8NEG2 295 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 OR6K2Q8NGY2 324 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 C3orf30Q96M34 536 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 SEMA3CQ99985 751 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 SGIP1Q9BQI5 828 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CCDC28BQ9BUN5 200 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 MAF1Q9H063 256 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRIM39Q9HCM9 518 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 NMRK2Q9NPI5 230 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRHDEQ9UKU6 1024 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC8A2Q9UPR5 921 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 HS6ST1O60243 411 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CBFA2T3O75081 653 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 SERPINB7O75635 380 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 MPOP05164 745 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF865P0CJ78 1059 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF37AP17032 561 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLDCP23378 1020 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CD97P48960 835 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 GATMP50440 423 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 MRPS15P82914 257 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 IL5RAQ01344 420 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 GSTM4Q03013 218 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 APOFQ13790 326 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 INPP5AQ14642 412 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 ALFQ53S48 1182 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 TAF2Q6P1X5 1199 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 ALKAL1Q6UXT8 129 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 ACMSDQ8TDX5 336 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 RHOJQ9H4E5 214 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 GABRQQ9UN88 632 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 USP3Q9Y6I4 520 aa9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 DNMT3AQ9Y6K1 912 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-202ENST00000439374 LOC100506127A0A0U1RQW1 187 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 SUPT3HB4E1H0 165 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 E9PAM4 449 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 MTSS1O43312 755 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 DIRAS1O95057 198 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 AGXTP21549 392 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 GABRB3P28472 473 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 FMO4P31512 558 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 TUFMP49411 452 aaKnown RBP9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRKAA2P54646 552 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 GEMP55040 296 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 RHDQ02161 417 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 EPS8Q12929 822 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 PAFAH1B3Q15102 231 aaKnown RBP9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 PTPRRQ15256 657 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 AAK1Q2M2I8 961 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZBED5Q49AG3 693 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 TMC5Q6UXY8 1006 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 LINC00523Q86TU6 105 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 RETREG3Q86VR2 466 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 TBC1D15Q8TC07 691 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 DACH2Q96NX9 599 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCTD14Q9BQ13 255 aaPredicted RBP9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 RAD21L1Q9H4I0 556 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 SPATA7Q9P0W8 599 aa9.9□□□□□ -0.83
CDC42SE1-202ENST00000439374 SHROOM3Q8TF72 1996 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 CBX4O00257 560 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 TFECO14948 347 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 GSTA4O15217 222 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 NCAM2O15394 837 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 TBX1O43435 398 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF24P17028 368 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 TRPC1P48995 793 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 FOXA1P55317 472 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCNA10Q16322 511 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 UGP2Q16851 508 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 MFSD14CQ5VZR4 134 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 KIAA1841Q6NSI8 718 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 CAMK1DQ8IU85 385 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC15A3Q8IY34 581 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR2T34Q8NGX1 318 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR2T3Q8NH03 318 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 CLHC1Q8NHS4 586 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 RANBP9Q96S59 729 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZIC5Q96T25 663 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 BEX2Q9BXY8 128 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 RGS18Q9NS28 235 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 KLQ9UEF7 1012 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 CIDEBQ9UHD4 219 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms