RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 Q8N9G6 341 aaPredicted RBP18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 WDR48Q8TAF3 677 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 PATE1Q8WXA2 126 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 OR2M4Q96R27 311 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 TRHDEQ9UKU6 1024 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 PRKAB1Q9Y478 270 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 APC2O95996 2303 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 NUDT21O43809 227 aaKnown RBP18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 EML2O95834 649 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 FTCDO95954 541 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 RPLP0P05388 317 aaKnown RBP18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 EIF2S3P41091 472 aaKnown RBP18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 DCDC1P59894 354 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 GABREP78334 506 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 KIF5AQ12840 1032 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 TBC1D25Q3MII6 688 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 ALS2CLQ60I27 953 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 TMPRSS9Q7Z410 1059 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 CCNJLQ8IV13 435 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 TTC30BQ8N4P2 665 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 FGF11Q92914 225 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 GRAMD1AQ96CP6 724 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 GPR63Q9BZJ6 419 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 POLR1BQ9H9Y6 1135 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 ARFGAP3Q9NP61 516 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 VPS18Q9P253 973 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 ATXN10Q9UBB4 475 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 NFKBIL1Q9UBC1 381 aaPredicted RBP18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 TMPRSS11EQ9UL52 423 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 CHD6Q8TD26 2715 aa18.18■□□□□ 0.5
SMARCAL1-205ENST00000425815 ANKRD11Q6UB99 2663 aaPredicted RBP18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 DXOO77932 396 aaKnown RBP18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ASMTLO95671 621 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 RBP3P10745 1247 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ACTR1BP42025 376 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 EIF3EP60228 445 aaKnown RBP18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ACTR1AP61163 376 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SPIDRQ14159 915 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SLC1A5Q15758 541 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 PEX26Q7Z412 305 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ZNF438Q7Z4V0 828 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SPRED1Q7Z699 444 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SLC25A41Q8N5S1 370 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 TRAM1L1Q8N609 369 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SNIP1Q8TAD8 396 aaKnown RBP18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 GFM1Q96RP9 751 aaKnown RBP18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SPATA16Q9BXB7 569 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 CDH19Q9H159 772 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 BPIFA1Q9NP55 256 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ASCL3Q9NQ33 180 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 RSPH14Q9UHP6 348 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ZNHIT2Q9UHR6 403 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ATXN7L1Q9ULK2 861 aaPredicted RBP18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 SATB2Q9UPW6 733 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 ADGRG1Q9Y653 693 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 CAPN6Q9Y6Q1 641 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 MYLKQ15746 1914 aa18.17■□□□□ 0.5
SMARCAL1-205ENST00000425815 PPM1DO15297 605 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 NUAK1O60285 661 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 TJP3O95049 919 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 AGTP01019 485 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 SLC4A1P02730 911 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ZNF8P17098 575 aaPredicted RBP18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ITPKBP27987 946 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 CA5AP35218 305 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 HMGCLP35914 325 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ZFP36L1Q07352 338 aaKnown RBP18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 MPP3Q13368 585 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 NR1D2Q14995 579 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 COL28A1Q2UY09 1125 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ANKRD20A2Q5SQ80 823 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 CCDC181Q5TID7 509 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ANKRD20A1Q5TYW2 823 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ANKRD20A3Q5VUR7 823 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 CCDC70Q6NSX1 233 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 ADGRG6Q86SQ4 1221 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 GALNT13Q8IUC8 556 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 IPMKQ8NFU5 416 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 HES6Q96HZ4 224 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 SLC46A1Q96NT5 459 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 SRPK1Q96SB4 655 aaKnown RBP18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 FOXP3Q9BZS1 431 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 GBA3Q9H227 469 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 SYNDIG1Q9H7V2 258 aa18.16■□□□□ 0.5
SMARCAL1-205ENST00000425815 RP1P56715 2156 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 ITPR1Q14643 2758 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 TCRBV7S2A1N4TA0A589 114 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 D6RAR5 112 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 ADRA1AP35348 466 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 ACTN2P35609 894 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 OR1D5P58170 312 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 KLF1Q13351 362 aaPredicted RBP18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 MSLNQ13421 630 aaPredicted RBP18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 OLIG2Q13516 323 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 LRP8Q14114 963 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 KHDC1Q4VXA5 237 aaKnown RBP18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 C3orf38Q5JPI3 329 aa18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 DARS2Q6PI48 645 aaKnown RBP18.15■□□□□ 0.5
SMARCAL1-205ENST00000425815 IGF2-ASQ6U949 168 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms